contig_metadata
7 rows where bioproject = "PRJNA603943" and tax_phylum = "Nematoda"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18994426 | 18994426 | PRJNA603943_P_NODE_10235_length_500_cov_2.517564_g10044_i0 | PRJNA603943 | 10235 | 500 | 2.517564 | 12.58782 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 375 | 2.5499999999999995e-99 | NTclustered | gi|268559799|ref|XM_002646027.1| | 6238 | g10044 | i0 | 85.135 | 74.978 | 370 | 51 | 74 | 4 | 5 | 372 | 940 | 1307 | Caenorhabditis briggsae Protein CBG07939 (CBG07939), partial mRNA | blastn | 37489 | 377 | 0.994694960212202 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 24803120 | 24803120 | PRJNA603943_P_NODE_28840_length_334_cov_1.180077_g28648_i0 | PRJNA603943 | 28840 | 334 | 1.180077 | 3.94145718 | Pristionchus americanus | 376549 | Nematoda | Nematoda | 224 | 6.31e-54 | NTclustered | gi|150982255|gb|EF634716.1| | 376549 | g28648 | i0 | 81.522 | 64.8263473053892 | 276 | 47 | 82 | 4 | 32 | 305 | 30 | 303 | Pristionchus americanus large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds | blastn | 21652 | 224 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus americanus | |
| 27522241 | 27522241 | PRJNA603943_P_NODE_16603_length_411_cov_2.153846_g16411_i0 | PRJNA603943 | 16603 | 411 | 2.153846 | 8.85230706 | Steinernema carpocapsae | 34508 | Nematoda | Nematoda | 74.7 | 2.55e-13 | NR | TKR89800.1 | 34508 | g16411 | i0 | 33.6 | 2.39416058394161 | 113 | 64 | 82.5 | 2 | 405 | 67 | 116 | 217 | TKR89800.1 hypothetical protein L596_013847 [Steinernema carpocapsae] | diamond | 984 | 74.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Steinernematidae | Steinernema | Steinernema carpocapsae | |
| 27775084 | 27775084 | PRJNA603943_P_NODE_37404_length_301_cov_1.008772_g37212_i0 | PRJNA603943 | 37404 | 301 | 1.008772 | 3.03640372 | Halicephalobus sp. NKZ332 | 2598192 | Nematoda | Nematoda | 70.5 | 1.33e-11 | NR | KAE9554332.1 | 2598192 | g37212 | i0 | 60.9 | 0.687707641196013 | 69 | 25 | 66.8 | 1 | 94 | 294 | 89 | 157 | KAE9554332.1 hypothetical protein FO519_002442 [Halicephalobus sp. NKZ332] | diamond | 207 | 70.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Halicephalobus | Halicephalobus sp. NKZ332 | |
| 28690768 | 28690768 | PRJNA603943_P_NODE_18027_length_399_cov_0.938650_g17835_i0 | PRJNA603943 | 18027 | 399 | 0.93865 | 3.7452135 | Mesorhabditis belari | 2138241 | Nematoda | Nematoda | 64.7 | 4.07e-9 | NR | CAJ0930483.1 | 2138241 | g17835 | i0 | 40 | 0.902255639097744 | 120 | 58 | 90.2 | 4 | 380 | 21 | 350 | 455 | CAJ0930483.1 unnamed protein product, partial [Mesorhabditis belari] | diamond | 360 | 64.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Mesorhabditis | Mesorhabditis belari | |
| 31610292 | 31610292 | PRJNA603943_P_NODE_57316_length_249_cov_0.875000_g57124_i0 | PRJNA603943 | 57316 | 249 | 0.875 | 2.17875 | Metazoa | 33208 | Nematoda | Nematoda | 107 | 5.06e-25 | NR | KAK5984319.1 | 6319 | g57124 | i0 | 66.2 | 19.8313253012048 | 77 | 26 | 92.8 | 0 | 242 | 12 | 559 | 635 | KAK5984319.1 Sodium/potassium-transporting ATPase subunit alpha-A [Trichostrongylus colubriformis] | diamond | 4938 | 107 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Trichostrongylidae | Trichostrongylus | Trichostrongylus colubriformis | |
| 31673388 | 31673388 | PRJNA603943_P_NODE_15677_length_421_cov_1.100575_g15485_i0 | PRJNA603943 | 15677 | 421 | 1.100575 | 4.63342075 | Caenorhabditis | 6237 | Nematoda | Nematoda | 84 | 5.02e-16 | NR | NP_001369965.1 | 6239 | g15485 | i0 | 76.7 | 2.47268408551069 | 43 | 10 | 30.6 | 0 | 419 | 291 | 303 | 345 | NP_001369965.1 Peptidase C1A papain C-terminal domain-containing protein [Caenorhabditis elegans] | diamond | 1041 | 84.7 | 0.991735537190083 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;