RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA603943" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA603943 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6955266 6955266 PRJNA603943_P_NODE_30566_length_326_cov_203.691700_g30374_i0 PRJNA603943 30566 326 203.6917 664.034942 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 132 3.83e-26   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g30374 i0 100 4.16564417177914 71 0 44 0 244 314 1 71 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 1358 132 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
6955318 6955318 PRJNA603943_P_NODE_32386_length_319_cov_1400.666667_g32194_i0 PRJNA603943 32386 319 1400.666667 4468.12666773 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 132 3.73e-26   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g32194 i0 100 3.51097178683386 71 0 40 0 74 144 1 71 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 1120 132 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
9506498 9506498 PRJNA603943_P_NODE_70748_length_234_cov_9.124224_g70556_i0 PRJNA603943 70748 234 9.124224 21.35068416 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 124 4.38e-24   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g70556 i0 98.592 3.88888888888889 71 0 47 1 33 102 71 1 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 910 124 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
10782399 10782399 PRJNA603943_P_NODE_70949_length_223_cov_49.080000_g70757_i0 PRJNA603943 70949 223 49.08 109.4484 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 126 1.15e-24   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g70757 i0 100 3.81165919282511 68 0 44 0 156 223 71 4 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 850 126 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
13330826 13330826 PRJNA603943_P_NODE_25491_length_349_cov_191.666667_g25299_i0 PRJNA603943 25491 349 191.666667 668.91666783 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 132 4.12e-26   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g25299 i0 100 3.02578796561605 71 0 29 0 267 337 1 71 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 1056 132 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
17155201 17155201 PRJNA603943_P_NODE_49594_length_260_cov_405.780749_g49402_i0 PRJNA603943 49594 260 405.780749 1055.0299474 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 132 2.96e-26   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g49402 i0 100 3.57692307692308 71 0 39 0 178 248 1 71 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 930 132 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
24802994 24802994 PRJNA603943_P_NODE_24180_length_356_cov_30.643110_g23988_i0 PRJNA603943 24180 356 30.64311 109.0894716 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 132 4.21e-26   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g23988 i0 100 2.46067415730337 71 0 39 0 281 351 1 71 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 876 132 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
24804316 24804316 PRJNA603943_P_NODE_71000_length_196_cov_5.357724_g70808_i0 PRJNA603943 71000 196 5.357724 10.50113904 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 115 2.13e-21   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g70808 i0 98.485 3.24489795918367 66 0 33 1 130 194 71 6 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 636 115 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;