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contig_metadata

14 rows where bioproject = "PRJNA603943" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 14 ✖

bioproject 1

  • PRJNA603943 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5680603 5680603 PRJNA603943_P_NODE_27865_length_338_cov_1.464151_g27673_i0 PRJNA603943 27865 338 1.464151 4.94883038 Chlamydomonas schloesseri 2026947 Plants Plants 171 2.4e-52   NR KAG2453719.1 2026947 g27673 i0 78.8 0.923076923076923 104 21 91.4 1 336 28 53 156 KAG2453719.1 hypothetical protein HYH02_001931 [Chlamydomonas schloesseri] diamond 312 171 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas schloesseri
15879281 15879281 PRJNA603943_P_NODE_11873_length_470_cov_2.506297_g11681_i0 PRJNA603943 11873 470 2.506297 11.7795959 Auxenochlorella protothecoides 3075 Plants Plants 359 2.4e-94   NTclustered gi|760444702|ref|XM_011401118.1| 3075 g11681 i0 84.615 66.1744680851064 364 52 77 3 80 441 485 124 Auxenochlorella protothecoides 40S ribosomal protein S23-2 partial mRNA blastn 31102 359 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
23530045 23530045 PRJNA603943_P_NODE_51599_length_254_cov_1.276243_g51407_i0 PRJNA603943 51599 254 1.276243 3.24165722 Trebouxia sp. SL0000003 3350044 Plants Plants 52.8 0.023   NTclustered gi|2917929623|emb|OZ234911.1| 3350044 g51407 i0 100 0.110236220472441 28 0 11 0 69 96 1862726 1862699 Trebouxia sp. SL0000003 genome assembly, chromosome: 6 blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
28198453 28198453 PRJNA603943_P_NODE_45506_length_274_cov_1.253731_g45314_i0 PRJNA603943 45506 274 1.253731 3.43522294 Chlorella 3071 Plants Plants 45.8 0.00394   NR PRW56988.1 3076 g45314 i0 48.9 0.985401459854015 45 23 49.3 0 35 169 44 88 PRW56988.1 DNA-3-methyladenine glycosylase [Chlorella sorokiniana] diamond 270 46.2 0.991341991341991 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
28659123 28659123 PRJNA603943_P_NODE_17987_length_399_cov_1.251534_g17795_i0 PRJNA603943 17987 399 1.251534 4.99362066 Coccomyxa sp. Obi 2315456 Plants Plants 56.2 4.23e-6   NR BDA50364.1 2315456 g17795 i0 35.4 0.744360902255639 99 57 73.7 2 103 396 255 347 BDA50364.1 5'-3' exoribonuclease 2 [Coccomyxa sp. Obi] diamond 297 56.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
28848252 28848252 PRJNA603943_P_NODE_63348_length_245_cov_0.895349_g63156_i0 PRJNA603943 63348 245 0.895349 2.19360505 Chlamydomonas schloesseri 2026947 Plants Plants 52 1.69e-5   NR KAG2448812.1 2026947 g63156 i0 45.9 2.71836734693878 74 33 85.7 2 243 34 82 152 KAG2448812.1 hypothetical protein HYH02_006163 [Chlamydomonas schloesseri] diamond 666 52 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas schloesseri
29321982 29321982 PRJNA603943_P_NODE_31329_length_324_cov_0.856574_g31137_i0 PRJNA603943 31329 324 0.856574 2.77529976 Tetradesmus obliquus 3088 Plants Plants 139 6.41e-39   NR WIA40074.1 3088 g31137 i0 63 3 108 40 100 0 324 1 78 185 WIA40074.1 hypothetical protein OEZ86_013489 [Tetradesmus obliquus] diamond 972 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29858763 29858763 PRJNA603943_P_NODE_61011_length_246_cov_1.329480_g60819_i0 PRJNA603943 61011 246 1.32948 3.2705208 Volvox carteri f. nagariensis 3068 Plants Plants 40 0.0375   NR XP_002955050.1 3068 g60819 i0 47.2 0.439024390243902 36 19 43.9 0 245 138 11 46 XP_002955050.1 uncharacterized protein VOLCADRAFT_47552, partial [Volvox carteri f. nagariensis] diamond 108 40 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
30409533 30409533 PRJNA603943_P_NODE_22073_length_369_cov_1.351351_g21881_i0 PRJNA603943 22073 369 1.351351 4.98648519 Chlorophyceae 3166 Plants Plants 92 8.14e-19   NR XP_013903103.1 145388 g21881 i0 69.5 1.91869918699187 59 18 48 0 3 179 499 557 XP_013903103.1 F-type H+-transporting ATPase subunit beta [Monoraphidium neglectum] diamond 708 92.8 0.991379310344828 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
31818311 31818311 PRJNA603943_P_NODE_53857_length_251_cov_0.865169_g53665_i0 PRJNA603943 53857 251 0.865169 2.17157419 Edaphochlamys debaryana 47281 Plants Plants 43.5 0.0207   NR KAG2484077.1 47281 g53665 i0 36.2 0.561752988047809 47 30 56.2 0 143 3 1 47 KAG2484077.1 hypothetical protein HYH03_017096 [Edaphochlamys debaryana] diamond 141 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
32134913 32134913 PRJNA603943_P_NODE_68038_length_242_cov_0.911243_g67846_i0 PRJNA603943 68038 242 0.911243 2.20520806 Chlorella sorokiniana 3076 Plants Plants 51.6 2.84e-5   NR PRW57253.1 3076 g67846 i0 66.7 0.409090909090909 33 11 40.9 0 102 4 1752 1784 PRW57253.1 Phosphatidylinositol 4-kinase alpha 1 [Chlorella sorokiniana] diamond 99 51.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
32451449 32451449 PRJNA603943_P_NODE_5919_length_628_cov_2.812613_g5734_i0 PRJNA603943 5919 628 2.812613 17.66320964 Chlamydomonas eustigma 1157962 Plants Plants 95.1 2.16e-21   NR GAX78538.1 1157962 g5734 i0 64.8 0.515923566878981 108 34 51.6 1 595 272 4 107 GAX78538.1 hypothetical protein CEUSTIGMA_g5978.t1 [Chlamydomonas eustigma] diamond 324 95.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
32559637 32559637 PRJNA603943_P_NODE_52099_length_252_cov_1.564246_g51907_i0 PRJNA603943 52099 252 1.564246 3.94189992 Volvox 3066 Plants Plants 77.4 2.25e-14   NR XP_002950948.1 3068 g51907 i0 48 11.6309523809524 75 33 89.3 1 26 250 351 419 XP_002950948.1 uncharacterized protein VOLCADRAFT_74841 [Volvox carteri f. nagariensis] diamond 2931 77.8 0.994858611825193 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
32672039 32672039 PRJNA603943_P_NODE_54520_length_250_cov_0.870056_g54328_i0 PRJNA603943 54520 250 0.870056 2.17514 Raphidocelis subcapitata 307507 Plants Plants 94.4 2.88e-20   NR GBF89409.1 307507 g54328 i0 70 1.44 60 18 72 0 2 181 339 398 GBF89409.1 tRNA (cytosine(34)-C(5))-methyltransferase [Raphidocelis subcapitata] diamond 360 94.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;