RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA603943", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA603943 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4404522 4404522 PRJNA603943_P_NODE_2704_length_871_cov_9.823308_g2551_i0 PRJNA603943 2704 871 9.823308 85.56101268 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 129 7.12e-32   NR TEB19254.1 2494336 g2551 i0 33.7 0.91963260619977 267 155 85.8 8 836 90 1 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 801 129 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
27093227 27093227 PRJNA603943_P_NODE_68782_length_242_cov_0.911243_g68590_i0 PRJNA603943 68782 242 0.911243 2.20520806 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 58.9 7.72e-9   NR KAF4712539.1 32597 g68590 i0 44.9 3.03719008264463 49 27 60.7 0 86 232 60 108 KAF4712539.1 hypothetical protein FOZ62_007533 [Perkinsus olseni] diamond 735 58.9 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32039872 32039872 PRJNA603943_P_NODE_1718_length_1045_cov_10.373457_g1587_i0 PRJNA603943 1718 1045 10.373457 108.40262565 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 172 6.62e-48   NR TEB19254.1 2494336 g1587 i0 41.5 0.760765550239234 265 143 73.5 4 984 217 2 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 795 172 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;