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contig_metadata

16 rows where bioproject = "PRJNA603943", tax_clade = "Opisthokonta" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 16 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 16 ✖

bioproject 1

  • PRJNA603943 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19703275 19703275 PRJNA603943_P_NODE_21176_length_375_cov_1.152318_g20984_i0 PRJNA603943 21176 375 1.152318 4.3211925 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 580 3.68e-161   NTclustered gi|116834194|gb|EF032038.1| 307972 g20984 i0 98.777 1.01333333333333 327 2 87 1 1 327 190 514 Apostichopus japonicus clone AH049 microsatellite sequence blastn 380 580 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
22254631 22254631 PRJNA603943_P_NODE_52618_length_251_cov_0.865169_g52426_i0 PRJNA603943 52618 251 0.865169 2.17157419 Stichopus oshimae 7693 Echinodermata other_Eukaryota 67.6 8.12e-7   NTclustered gi|10196|emb|X01002.1| 7693 g52426 i0 97.436 0.302788844621514 39 1 16 0 112 150 1 39 Stichopus oshimae 5S rRNA sequence blastn 76 67.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Stichopus Stichopus oshimae
26744714 26744714 PRJNA603943_P_NODE_3021_length_834_cov_1.738502_g2862_i0 PRJNA603943 3021 834 1.738502 14.49910668 Echinodermata 7586 Echinodermata other_Eukaryota 135 4.2499999999999996e-32   NR XP_022081188.1 133434 g2862 i0 39.7 3.11870503597122 174 93 60.8 4 3 509 388 554 XP_022081188.1 uncharacterized protein LOC110974122 [Acanthaster planci] diamond 2601 136 0.992647058823529 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
26890380 26890380 PRJNA603943_P_NODE_58501_length_248_cov_0.880000_g58309_i0 PRJNA603943 58501 248 0.88 2.1824 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 49.7 1.39e-4   NR PIK59500.1 307972 g58309 i0 74.2 0.375 31 8 37.5 0 181 89 323 353 PIK59500.1 putative zinc finger CCCH-type containing 15 [Apostichopus japonicus] diamond 93 49.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
27282961 27282961 PRJNA603943_P_NODE_53283_length_251_cov_0.865169_g53091_i0 PRJNA603943 53283 251 0.865169 2.17157419 Metazoa 33208 Echinodermata other_Eukaryota 53.9 1e-6   NR XP_038059709.1 46514 g53091 i0 44.9 4.23107569721116 69 37 81.3 1 249 46 63 131 XP_038059709.1 microsomal glutathione S-transferase 3-like [Patiria miniata] diamond 1062 54.3 0.992633517495396 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
27396225 27396225 PRJNA603943_P_NODE_50263_length_258_cov_1.654054_g50071_i0 PRJNA603943 50263 258 1.654054 4.26745932 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 73.9 4.6e-13   NR PIK42423.1 307972 g50071 i0 100 0.372093023255814 32 0 37.2 0 163 258 1 32 PIK42423.1 hypothetical protein BSL78_20719 [Apostichopus japonicus] diamond 96 73.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
27648772 27648772 PRJNA603943_P_NODE_69544_length_241_cov_0.916667_g69352_i0 PRJNA603943 69544 241 0.916667 2.20916747 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 76.6 2.39e-14   NR PIK58224.1 307972 g69352 i0 100 0.485477178423237 39 0 48.5 0 107 223 273 311 PIK58224.1 putative 5'-3' exoribonuclease 1-like [Apostichopus japonicus] diamond 117 76.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
27964312 27964312 PRJNA603943_P_NODE_57825_length_248_cov_0.880000_g57633_i0 PRJNA603943 57825 248 0.88 2.1824 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 118 2.8e-30   NR KAJ8026355.1 206669 g57633 i0 89.6 0.810483870967742 67 7 81 0 2 202 237 303 KAJ8026355.1 TWiK family of potassium channels protein 9 [Holothuria leucospilota] diamond 201 118 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
28248341 28248341 PRJNA603943_P_NODE_32146_length_321_cov_0.794355_g31954_i0 PRJNA603943 32146 321 0.794355 2.54987955 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 90.1 2.12e-18   NR PIK46803.1 307972 g31954 i0 95.7 0.439252336448598 47 2 43.9 0 123 263 47 93 PIK46803.1 putative cat eye syndrome critical region protein 2-like isoform X2 [Apostichopus japonicus] diamond 141 90.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
28753682 28753682 PRJNA603943_P_NODE_2647_length_879_cov_1.488834_g2495_i0 PRJNA603943 2647 879 1.488834 13.08685086 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 60.8 1.56e-6   NR XP_041457912.1 7654 g2495 i0 34.2 0.378839590443686 111 70 37.9 3 148 480 191 298 XP_041457912.1 uncharacterized protein LOC121410105 [Lytechinus variegatus] diamond 333 60.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
28753711 28753711 PRJNA603943_P_NODE_63867_length_245_cov_0.895349_g63675_i0 PRJNA603943 63867 245 0.895349 2.19360505 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 69.7 1.22e-11   NR KAJ8036972.1 206669 g63675 i0 81.8 0.538775510204082 44 8 53.9 0 3 134 406 449 KAJ8036972.1 Kinesin-like protein KIF19 [Holothuria leucospilota] diamond 132 69.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
31009462 31009462 PRJNA603943_P_NODE_35034_length_309_cov_1.449153_g34842_i0 PRJNA603943 35034 309 1.449153 4.47788277 root 1 Root_unresolved Root_unresolved 91.7 5.12e-19   NR XP_038074569.1 46514 g34842 i0 48.4 7.6504854368932 95 34 92.2 2 24 308 424 503 XP_038074569.1 dye-decolorizing peroxidase msp1-like [Patiria miniata] diamond 2364 92 0.996739130434783 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
31547165 31547165 PRJNA603943_P_NODE_69416_length_241_cov_0.916667_g69224_i0 PRJNA603943 69416 241 0.916667 2.20916747 Aspidochirotida 7682 Echinodermata other_Eukaryota 43.5 0.0182   NR KAJ8044767.1 206669 g69224 i0 77.3 0.547717842323652 22 5 27.4 0 130 195 193 214 KAJ8044767.1 Protein STPG4 [Holothuria leucospilota] diamond 132 43.9 0.990888382687927 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
32134910 32134910 PRJNA603943_P_NODE_64758_length_244_cov_0.900585_g64566_i0 PRJNA603943 64758 244 0.900585 2.1974274 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 55.8 9.01e-7   NR PIK43806.1 307972 g64566 i0 96.4 0.344262295081967 28 1 34.4 0 118 201 2 29 PIK43806.1 putative trafficking kinesin-binding protein 1 [Apostichopus japonicus] diamond 84 55.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
32577855 32577855 PRJNA603943_P_NODE_70439_length_241_cov_0.916667_g70247_i0 PRJNA603943 70439 241 0.916667 2.20916747 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 45.8 0.00286   NR PIK38398.1 307972 g70247 i0 86.4 0.560165975103734 22 3 27.4 0 95 160 125 146 PIK38398.1 hypothetical protein BSL78_24766 [Apostichopus japonicus] diamond 135 45.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
32797847 32797847 PRJNA603943_P_NODE_56480_length_249_cov_0.875000_g56288_i0 PRJNA603943 56480 249 0.875 2.17875 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 168 1.4e-48   NR PIK56379.1 307972 g56288 i0 100 1.96385542168675 81 0 97.6 0 5 247 1 81 PIK56379.1 hypothetical protein BSL78_06753 [Apostichopus japonicus] diamond 489 168 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;