RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA603943" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA603943 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27932820 27932820 PRJNA603943_P_NODE_7405_length_571_cov_2.094378_g7218_i0 PRJNA603943 7405 571 2.094378 11.95889838 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 137 5.78e-36   NR KAG9391426.1 201153 g7218 i0 45.4 1.72854640980736 163 70 85.6 2 77 565 12 155 KAG9391426.1 Hydrogenosomal membrane protein 31-like [Carpediemonas membranifera] diamond 987 137 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
28122251 28122251 PRJNA603943_P_NODE_63605_length_245_cov_0.895349_g63413_i0 PRJNA603943 63605 245 0.895349 2.19360505 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 60.8 1.56e-8   NR KAJ5074193.1 1746090 g63413 i0 47.6 2.48571428571429 63 33 77.1 0 238 50 125 187 KAJ5074193.1 serine/threonine-protein phosphatase 2a 65 kda regulatory subunit a beta isoform [Anaeramoeba ignava] diamond 609 60.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
30174680 30174680 PRJNA603943_P_NODE_19052_length_390_cov_1.716088_g18860_i0 PRJNA603943 19052 390 1.716088 6.6927432 Streblomastix strix 222440 Preaxostyla other_Eukaryota 69.3 9.03e-12   NR KAA6388004.1 222440 g18860 i0 63.8 0.361538461538462 47 17 36.2 0 388 248 120 166 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 141 69.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
32324949 32324949 PRJNA603943_P_NODE_45199_length_275_cov_1.143564_g45007_i0 PRJNA603943 45199 275 1.143564 3.144801 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 74.7 3.12e-13   NR GKT36102.1 2918883 g45007 i0 39.6 1.98545454545455 91 55 99.3 0 274 2 77 167 GKT36102.1 Transposon Tf2-8 polyprotein [Aduncisulcus paluster] diamond 546 74.7 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;