RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA602115" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA602115 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13896850 13896850 PRJNA602115_P_NODE_6331_length_253_cov_1.000000_g6306_i0 PRJNA602115 6331 253 1 2.53 Opisthokonta 33154 Mollusca Mollusca 178 3.63e-40   NTclustered gi|1207937899|ref|XM_021502813.1| 6573 g6306 i0 86.42 59.3517786561265 162 22 64 0 68 229 180 19 PREDICTED: Mizuhopecten yessoensis 60S ribosomal protein L27a-like (LOC110453724), mRNA blastn 15016 178 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
30851491 30851491 PRJNA602115_P_NODE_9394_length_208_cov_0.870748_g9369_i0 PRJNA602115 9394 208 0.870748 1.81115584 Metazoa 33208 Mollusca Mollusca 46.2 0.00138   NR XP_048247981.1 6454 g9369 i0 34.3 3.49038461538462 67 40 96.6 1 207 7 118 180 XP_048247981.1 speckle-type POZ protein-like [Haliotis rufescens] diamond 726 46.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;