contig_metadata
13 rows where bioproject = "PRJNA602115" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2418174 | 2418174 | PRJNA602115_P_NODE_11122_length_203_cov_0.901408_g11097_i0 | PRJNA602115 | 11122 | 203 | 0.901408 | 1.82985824 | Cutibacterium | 1912216 | Bacteria | Bacteria | 375 | 9.24e-100 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g11097 | i0 | 100 | 51 | 203 | 0 | 100 | 0 | 1 | 203 | 1187493 | 1187695 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 10353 | 375 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 2418177 | 2418177 | PRJNA602115_P_NODE_2142_length_408_cov_1.023055_g2117_i0 | PRJNA602115 | 2142 | 408 | 1.023055 | 4.1740644 | Cutibacterium | 1912216 | Bacteria | Bacteria | 754 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g2117 | i0 | 100 | 300.303921568627 | 408 | 0 | 100 | 0 | 1 | 408 | 55601 | 56008 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 122524 | 754 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 2418179 | 2418179 | PRJNA602115_P_NODE_2782_length_362_cov_1.684385_g2757_i0 | PRJNA602115 | 2782 | 362 | 1.684385 | 6.0974737 | Mycobacteriaceae | 1762 | Bacteria | Bacteria | 664 | 0 | NTclustered | gi|1935556990|gb|CP062008.1| | 1226753 | g2757 | i0 | 99.724 | 187.055248618785 | 362 | 1 | 100 | 0 | 1 | 362 | 1387858 | 1387497 | Mycolicibacterium mucogenicum DSM 44124 chromosome, complete genome | blastn | 67714 | 669 | 0.992526158445441 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium mucogenicum | ||
| 8229093 | 8229093 | PRJNA602115_P_NODE_9887_length_206_cov_0.882759_g9862_i0 | PRJNA602115 | 9887 | 206 | 0.882759 | 1.81848354 | Williamsia herbipolensis | 1603258 | Bacteria | Bacteria | 335 | 1.5999999999999997e-87 | NTclustered | gi|2658946156|gb|CP108021.1| | 1603258 | g9862 | i0 | 96.117 | 325.417475728155 | 206 | 7 | 100 | 1 | 1 | 206 | 3888 | 3684 | Williamsia herbipolensis strain NBC_00319 chromosome, complete genome | blastn | 67036 | 335 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Williamsia | Williamsia herbipolensis | ||
| 9504244 | 9504244 | PRJNA602115_P_NODE_9228_length_208_cov_0.870748_g9203_i0 | PRJNA602115 | 9228 | 208 | 0.870748 | 1.81115584 | Geodermatophilaceae bacterium NBWT11 | 2596920 | Bacteria | Bacteria | 219 | 1.7e-52 | NTclustered | gi|1891431189|gb|CP043652.1| | 2596920 | g9203 | i0 | 88.043 | 78.7596153846154 | 184 | 22 | 88 | 0 | 25 | 208 | 121409 | 121592 | Geodermatophilaceae bacterium NBWT11 chromosome, complete genome | blastn | 16382 | 219 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Geodermatophilaceae bacterium NBWT11 | |||
| 12621920 | 12621920 | PRJNA602115_P_NODE_8770_length_209_cov_0.864865_g8745_i0 | PRJNA602115 | 8770 | 209 | 0.864865 | 1.80756785 | Actinomycetes | 1760 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|1021079766|dbj|AP017424.1| | 39478 | g8745 | i0 | 100 | 0.267942583732057 | 28 | 0 | 13 | 0 | 68 | 95 | 68121 | 68148 | Streptomyces laurentii DNA, complete genome, strain: ATCC 31255 | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces laurentii | ||
| 17153300 | 17153300 | PRJNA602115_P_NODE_10214_length_205_cov_0.888889_g10189_i0 | PRJNA602115 | 10214 | 205 | 0.888889 | 1.82222245 | Mycolicibacterium aubagnense | 319707 | Bacteria | Bacteria | 350 | 5.669999999999999e-92 | NTclustered | gi|1806292234|dbj|AP022577.1| | 319707 | g10189 | i0 | 97.549 | 5.97073170731707 | 204 | 5 | 99 | 0 | 1 | 204 | 3328729 | 3328932 | Mycolicibacterium aubagnense JCM 15296 DNA, complete genome | blastn | 1224 | 350 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium aubagnense | ||
| 24801907 | 24801907 | PRJNA602115_P_NODE_3500_length_327_cov_0.778195_g3475_i0 | PRJNA602115 | 3500 | 327 | 0.778195 | 2.54469765 | Corynebacterium matruchotii | 43768 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|1540233514|emb|LR134504.1| | 43768 | g3475 | i0 | 100 | 0.171253822629969 | 28 | 0 | 9 | 0 | 151 | 178 | 2042681 | 2042708 | Corynebacterium matruchotii strain NCTC10206 genome assembly, chromosome: 1 | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium matruchotii | ||
| 25369198 | 25369198 | PRJNA602115_P_NODE_4000_length_309_cov_1.161290_g3975_i0 | PRJNA602115 | 4000 | 309 | 1.16129 | 3.5883861 | Mycobacteriaceae | 1762 | Bacteria | Bacteria | 449 | 8.76e-122 | NTclustered | gi|2118065613|gb|CP084713.1| | 319706 | g3975 | i0 | 92.903 | 155.145631067961 | 310 | 20 | 100 | 2 | 1 | 309 | 1313246 | 1312938 | Mycolicibacterium phocaicum strain RL-HY01 chromosome, complete genome | blastn | 47940 | 449 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium phocaicum | ||
| 28943430 | 28943430 | PRJNA602115_P_NODE_11188_length_203_cov_0.901408_g11163_i0 | PRJNA602115 | 11188 | 203 | 0.901408 | 1.82985824 | Streptomyces sp. NBC_ | 1931 | Bacteria | Bacteria | 43.1 | 0.0159 | NR | WP_329376215.1 | 2903833 | g11163 | i0 | 51.4 | 1.0935960591133 | 37 | 16 | 51.7 | 1 | 48 | 152 | 69 | 105 | WP_329376215.1 mannosyltransferase family protein [Streptomyces sp. NBC_01351] | diamond | 222 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01351 | ||
| 30333196 | 30333196 | PRJNA602115_P_NODE_7932_length_223_cov_1.185185_g7907_i0 | PRJNA602115 | 7932 | 223 | 1.185185 | 2.64296255 | unclassified Micromonospora | 2617518 | Bacteria | Bacteria | 48.1 | 3.28e-4 | NR | WP_377583842.1 | 2617518 | g7907 | i0 | 44.8 | 0.780269058295964 | 58 | 26 | 71.3 | 2 | 42 | 200 | 169 | 225 | WP_377583842.1 MULTISPECIES: winged helix-turn-helix domain-containing protein [unclassified Micromonospora] | diamond | 174 | 48.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | |||
| 30616960 | 30616960 | PRJNA602115_P_NODE_8793_length_209_cov_0.864865_g8768_i0 | PRJNA602115 | 8793 | 209 | 0.864865 | 1.80756785 | Streptomyces sp. Ag82_O1-15 | 1938855 | Bacteria | Bacteria | 42 | 0.0445 | NR | WP_095850585.1 | 1938855 | g8768 | i0 | 38.7 | 0.889952153110048 | 62 | 35 | 87.6 | 2 | 2 | 184 | 384 | 443 | WP_095850585.1 MBL fold metallo-hydrolase [Streptomyces sp. Ag82_O1-15] | diamond | 186 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. Ag82_O1-15 | ||
| 31312207 | 31312207 | PRJNA602115_P_NODE_7895_length_224_cov_0.975460_g7870_i0 | PRJNA602115 | 7895 | 224 | 0.97546 | 2.1850304 | Williamsia serinedens | 391736 | Bacteria | Bacteria | 71.2 | 1.77e-14 | NR | MCP2159627.1 | 391736 | g7870 | i0 | 92.3 | 0.522321428571429 | 39 | 3 | 52.2 | 0 | 119 | 3 | 1 | 39 | MCP2159627.1 hypothetical protein [Williamsia serinedens] | diamond | 117 | 71.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Williamsia | Williamsia serinedens |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;