contig_metadata
25 rows where bioproject = "PRJNA602115" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2418174 | 2418174 | PRJNA602115_P_NODE_11122_length_203_cov_0.901408_g11097_i0 | PRJNA602115 | 11122 | 203 | 0.901408 | 1.82985824 | Cutibacterium | 1912216 | Bacteria | Bacteria | 375 | 9.24e-100 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g11097 | i0 | 100 | 51 | 203 | 0 | 100 | 0 | 1 | 203 | 1187493 | 1187695 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 10353 | 375 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 2418177 | 2418177 | PRJNA602115_P_NODE_2142_length_408_cov_1.023055_g2117_i0 | PRJNA602115 | 2142 | 408 | 1.023055 | 4.1740644 | Cutibacterium | 1912216 | Bacteria | Bacteria | 754 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g2117 | i0 | 100 | 300.303921568627 | 408 | 0 | 100 | 0 | 1 | 408 | 55601 | 56008 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 122524 | 754 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 2418179 | 2418179 | PRJNA602115_P_NODE_2782_length_362_cov_1.684385_g2757_i0 | PRJNA602115 | 2782 | 362 | 1.684385 | 6.0974737 | Mycobacteriaceae | 1762 | Bacteria | Bacteria | 664 | 0 | NTclustered | gi|1935556990|gb|CP062008.1| | 1226753 | g2757 | i0 | 99.724 | 187.055248618785 | 362 | 1 | 100 | 0 | 1 | 362 | 1387858 | 1387497 | Mycolicibacterium mucogenicum DSM 44124 chromosome, complete genome | blastn | 67714 | 669 | 0.992526158445441 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium mucogenicum | ||
| 8229093 | 8229093 | PRJNA602115_P_NODE_9887_length_206_cov_0.882759_g9862_i0 | PRJNA602115 | 9887 | 206 | 0.882759 | 1.81848354 | Williamsia herbipolensis | 1603258 | Bacteria | Bacteria | 335 | 1.5999999999999997e-87 | NTclustered | gi|2658946156|gb|CP108021.1| | 1603258 | g9862 | i0 | 96.117 | 325.417475728155 | 206 | 7 | 100 | 1 | 1 | 206 | 3888 | 3684 | Williamsia herbipolensis strain NBC_00319 chromosome, complete genome | blastn | 67036 | 335 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Williamsia | Williamsia herbipolensis | ||
| 9504244 | 9504244 | PRJNA602115_P_NODE_9228_length_208_cov_0.870748_g9203_i0 | PRJNA602115 | 9228 | 208 | 0.870748 | 1.81115584 | Geodermatophilaceae bacterium NBWT11 | 2596920 | Bacteria | Bacteria | 219 | 1.7e-52 | NTclustered | gi|1891431189|gb|CP043652.1| | 2596920 | g9203 | i0 | 88.043 | 78.7596153846154 | 184 | 22 | 88 | 0 | 25 | 208 | 121409 | 121592 | Geodermatophilaceae bacterium NBWT11 chromosome, complete genome | blastn | 16382 | 219 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Geodermatophilaceae bacterium NBWT11 | |||
| 12054983 | 12054983 | PRJNA602115_P_NODE_4710_length_289_cov_1.122807_g4685_i0 | PRJNA602115 | 4710 | 289 | 1.1228070000000001 | 3.24491223 | root | 1 | Root_unresolved | Root_unresolved | 105 | 8.39e-27 | NR | MRA94127.1 | 1428 | g4685 | i0 | 81.3 | 47.8339100346021 | 64 | 12 | 66.4 | 0 | 289 | 98 | 68 | 131 | MRA94127.1 30S ribosomal protein S9 [Bacillus thuringiensis] | diamond | 13824 | 105 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus thuringiensis | ||
| 12621920 | 12621920 | PRJNA602115_P_NODE_8770_length_209_cov_0.864865_g8745_i0 | PRJNA602115 | 8770 | 209 | 0.864865 | 1.80756785 | Actinomycetes | 1760 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|1021079766|dbj|AP017424.1| | 39478 | g8745 | i0 | 100 | 0.267942583732057 | 28 | 0 | 13 | 0 | 68 | 95 | 68121 | 68148 | Streptomyces laurentii DNA, complete genome, strain: ATCC 31255 | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces laurentii | ||
| 17153300 | 17153300 | PRJNA602115_P_NODE_10214_length_205_cov_0.888889_g10189_i0 | PRJNA602115 | 10214 | 205 | 0.888889 | 1.82222245 | Mycolicibacterium aubagnense | 319707 | Bacteria | Bacteria | 350 | 5.669999999999999e-92 | NTclustered | gi|1806292234|dbj|AP022577.1| | 319707 | g10189 | i0 | 97.549 | 5.97073170731707 | 204 | 5 | 99 | 0 | 1 | 204 | 3328729 | 3328932 | Mycolicibacterium aubagnense JCM 15296 DNA, complete genome | blastn | 1224 | 350 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium aubagnense | ||
| 21544792 | 21544792 | PRJNA602115_P_NODE_8477_length_213_cov_2.572368_g8452_i0 | PRJNA602115 | 8477 | 213 | 2.572368 | 5.47914384 | Exiguobacterium | 33986 | Bacteria | Bacteria | 394 | 2.7e-105 | NTclustered | gi|2452055134|gb|CP109617.1| | 307643 | g8452 | i0 | 100 | 494.018779342723 | 213 | 0 | 100 | 0 | 1 | 213 | 40915 | 40703 | Exiguobacterium profundum strain TSS-3 chromosome, complete genome | blastn | 105226 | 394 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium profundum | |||
| 24801907 | 24801907 | PRJNA602115_P_NODE_3500_length_327_cov_0.778195_g3475_i0 | PRJNA602115 | 3500 | 327 | 0.778195 | 2.54469765 | Corynebacterium matruchotii | 43768 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|1540233514|emb|LR134504.1| | 43768 | g3475 | i0 | 100 | 0.171253822629969 | 28 | 0 | 9 | 0 | 151 | 178 | 2042681 | 2042708 | Corynebacterium matruchotii strain NCTC10206 genome assembly, chromosome: 1 | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium matruchotii | ||
| 25369198 | 25369198 | PRJNA602115_P_NODE_4000_length_309_cov_1.161290_g3975_i0 | PRJNA602115 | 4000 | 309 | 1.16129 | 3.5883861 | Mycobacteriaceae | 1762 | Bacteria | Bacteria | 449 | 8.76e-122 | NTclustered | gi|2118065613|gb|CP084713.1| | 319706 | g3975 | i0 | 92.903 | 155.145631067961 | 310 | 20 | 100 | 2 | 1 | 309 | 1313246 | 1312938 | Mycolicibacterium phocaicum strain RL-HY01 chromosome, complete genome | blastn | 47940 | 449 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium phocaicum | ||
| 27996026 | 27996026 | PRJNA602115_P_NODE_8805_length_209_cov_0.864865_g8780_i0 | PRJNA602115 | 8805 | 209 | 0.864865 | 1.80756785 | Intestinimonas | 1392389 | Bacteria | Bacteria | 68.6 | 2.28e-13 | NR | WP_195615481.1 | 1392389 | g8780 | i0 | 77.8 | 0.645933014354067 | 45 | 10 | 64.6 | 0 | 137 | 3 | 1 | 45 | WP_195615481.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Intestinimonas] | diamond | 135 | 68.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Intestinimonas | ||||
| 28943430 | 28943430 | PRJNA602115_P_NODE_11188_length_203_cov_0.901408_g11163_i0 | PRJNA602115 | 11188 | 203 | 0.901408 | 1.82985824 | Streptomyces sp. NBC_ | 1931 | Bacteria | Bacteria | 43.1 | 0.0159 | NR | WP_329376215.1 | 2903833 | g11163 | i0 | 51.4 | 1.0935960591133 | 37 | 16 | 51.7 | 1 | 48 | 152 | 69 | 105 | WP_329376215.1 mannosyltransferase family protein [Streptomyces sp. NBC_01351] | diamond | 222 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01351 | ||
| 28974846 | 28974846 | PRJNA602115_P_NODE_11448_length_202_cov_0.907801_g11423_i0 | PRJNA602115 | 11448 | 202 | 0.907801 | 1.83375802 | Paenibacillus mucilaginosus | 61624 | Bacteria | Bacteria | 41.2 | 0.0163 | NR | WP_014371261.1 | 61624 | g11423 | i0 | 37.8 | 0.54950495049505 | 37 | 23 | 55 | 0 | 157 | 47 | 48 | 84 | WP_014371261.1 DUF7667 family protein [Paenibacillus mucilaginosus] | diamond | 111 | 41.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus mucilaginosus | ||
| 29448076 | 29448076 | PRJNA602115_P_NODE_2570_length_377_cov_0.911392_g2545_i0 | PRJNA602115 | 2570 | 377 | 0.911392 | 3.43594784 | Vagococcus fluvialis | 2738 | Bacteria | Bacteria | 77 | 1.03e-15 | NR | WP_349738039.1 | 2738 | g2545 | i0 | 53.1 | 0.509283819628647 | 64 | 30 | 50.9 | 0 | 175 | 366 | 7 | 70 | WP_349738039.1 hypothetical protein [Vagococcus fluvialis] | diamond | 192 | 77 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Vagococcus | Vagococcus fluvialis | ||
| 29605830 | 29605830 | PRJNA602115_P_NODE_6610_length_247_cov_1.150538_g6585_i0 | PRJNA602115 | 6610 | 247 | 1.150538 | 2.84182886 | Brevibacillus agri | 51101 | Bacteria | Bacteria | 67.4 | 7.8e-11 | NR | WP_327944806.1 | 51101 | g6585 | i0 | 43.8 | 1.93117408906883 | 80 | 44 | 96 | 1 | 245 | 9 | 250 | 329 | WP_327944806.1 fibronectin type III domain-containing protein [Brevibacillus agri] | diamond | 477 | 67.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Brevibacillus agri | ||
| 29668967 | 29668967 | PRJNA602115_P_NODE_3730_length_318_cov_0.887160_g3705_i0 | PRJNA602115 | 3730 | 318 | 0.88716 | 2.8211688 | Bacillus amyloliquefaciens group | 1938374 | Bacteria | Bacteria | 43.1 | 0.0065 | NR | WP_032859190.1 | 1938374 | g3705 | i0 | 29.5 | 1.13207547169811 | 61 | 43 | 57.5 | 0 | 36 | 218 | 4 | 64 | WP_032859190.1 MULTISPECIES: hypothetical protein [Bacillus amyloliquefaciens group] | diamond | 360 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | |||
| 30333196 | 30333196 | PRJNA602115_P_NODE_7932_length_223_cov_1.185185_g7907_i0 | PRJNA602115 | 7932 | 223 | 1.185185 | 2.64296255 | unclassified Micromonospora | 2617518 | Bacteria | Bacteria | 48.1 | 3.28e-4 | NR | WP_377583842.1 | 2617518 | g7907 | i0 | 44.8 | 0.780269058295964 | 58 | 26 | 71.3 | 2 | 42 | 200 | 169 | 225 | WP_377583842.1 MULTISPECIES: winged helix-turn-helix domain-containing protein [unclassified Micromonospora] | diamond | 174 | 48.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | |||
| 30616960 | 30616960 | PRJNA602115_P_NODE_8793_length_209_cov_0.864865_g8768_i0 | PRJNA602115 | 8793 | 209 | 0.864865 | 1.80756785 | Streptomyces sp. Ag82_O1-15 | 1938855 | Bacteria | Bacteria | 42 | 0.0445 | NR | WP_095850585.1 | 1938855 | g8768 | i0 | 38.7 | 0.889952153110048 | 62 | 35 | 87.6 | 2 | 2 | 184 | 384 | 443 | WP_095850585.1 MBL fold metallo-hydrolase [Streptomyces sp. Ag82_O1-15] | diamond | 186 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. Ag82_O1-15 | ||
| 30869786 | 30869786 | PRJNA602115_P_NODE_634_length_730_cov_1.415546_g610_i0 | PRJNA602115 | 634 | 730 | 1.415546 | 10.3334858 | Clostridium chromiireducens | 225345 | Bacteria | Bacteria | 346 | 1.4099999999999995e-116 | NR | WP_160358929.1 | 225345 | g610 | i0 | 67.5 | 2.92191780821918 | 237 | 77 | 97.4 | 0 | 712 | 2 | 1 | 237 | WP_160358929.1 replication protein [Clostridium chromiireducens] | diamond | 2133 | 346 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium chromiireducens | ||
| 31185502 | 31185502 | PRJNA602115_P_NODE_2735_length_366_cov_1.259016_g2710_i0 | PRJNA602115 | 2735 | 366 | 1.259016 | 4.60799856 | Trichococcus patagoniensis | 382641 | Bacteria | Bacteria | 92.4 | 8.32e-22 | NR | WP_108033865.1 | 382641 | g2710 | i0 | 60.3 | 0.598360655737705 | 73 | 29 | 59.8 | 0 | 19 | 237 | 11 | 83 | WP_108033865.1 hypothetical protein [Trichococcus patagoniensis] | diamond | 219 | 92.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Trichococcus | Trichococcus patagoniensis | ||
| 31312207 | 31312207 | PRJNA602115_P_NODE_7895_length_224_cov_0.975460_g7870_i0 | PRJNA602115 | 7895 | 224 | 0.97546 | 2.1850304 | Williamsia serinedens | 391736 | Bacteria | Bacteria | 71.2 | 1.77e-14 | NR | MCP2159627.1 | 391736 | g7870 | i0 | 92.3 | 0.522321428571429 | 39 | 3 | 52.2 | 0 | 119 | 3 | 1 | 39 | MCP2159627.1 hypothetical protein [Williamsia serinedens] | diamond | 117 | 71.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Williamsia | Williamsia serinedens | ||
| 31438693 | 31438693 | PRJNA602115_P_NODE_11056_length_203_cov_0.901408_g11031_i0 | PRJNA602115 | 11056 | 203 | 0.901408 | 1.82985824 | Eubacteriaceae bacterium | 2049045 | Bacteria | Bacteria | 67.4 | 2.71e-11 | NR | MBR6801278.1 | 2049045 | g11031 | i0 | 44.8 | 0.990147783251232 | 67 | 37 | 99 | 0 | 1 | 201 | 157 | 223 | MBR6801278.1 protein rep [Eubacteriaceae bacterium] | diamond | 201 | 67.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriaceae | Eubacteriaceae bacterium | |||
| 32274807 | 32274807 | PRJNA602115_P_NODE_7098_length_238_cov_1.050847_g7073_i0 | PRJNA602115 | 7098 | 238 | 1.050847 | 2.50101586 | Bacillales | 1385 | Bacteria | Bacteria | 119 | 1.66e-32 | NR | WP_029053042.1 | 1569 | g7073 | i0 | 75.9 | 17.8739495798319 | 79 | 19 | 99.6 | 0 | 238 | 2 | 59 | 137 | WP_029053042.1 MULTISPECIES: nucleoside-diphosphate kinase [Sporosarcina] | diamond | 4254 | 119 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Sporosarcina | |||
| 32356501 | 32356501 | PRJNA602115_P_NODE_639_length_725_cov_1.418675_g615_i0 | PRJNA602115 | 639 | 725 | 1.418675 | 10.28539375 | Vagococcus fluvialis | 2738 | Bacteria | Bacteria | 180 | 1.3799999999999999e-52 | NR | WP_349738044.1 | 2738 | g615 | i0 | 66.2 | 0.562758620689655 | 136 | 40 | 53.8 | 1 | 392 | 3 | 1 | 136 | WP_349738044.1 hypothetical protein [Vagococcus fluvialis] | diamond | 408 | 180 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Vagococcus | Vagococcus fluvialis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;