RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA602115", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA602115 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14604775 14604775 PRJNA602115_P_NODE_9632_length_207_cov_0.876712_g9607_i0 PRJNA602115 9632 207 0.876712 1.81479384 Zychaea mexicana 64656 Fungi Fungi 124 3.7799999999999996e-24   NTclustered gi|2432174382|ref|XM_053127099.1| 64656 g9607 i0 84.252 0.613526570048309 127 20 61 0 81 207 1581 1455 Zychaea mexicana acyl-CoA dehydrogenase/oxidase (BDB00DRAFT_873514), partial mRNA blastn 127 124 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
18994316 18994316 PRJNA602115_P_NODE_7015_length_239_cov_1.348315_g6990_i0 PRJNA602115 7015 239 1.348315 3.22247285 Mucorales 4827 Fungi Fungi 172 1.58e-38   NTclustered gi|2724928501|ref|XM_064821648.1| 708070 g6990 i0 81.364 52.8702928870293 220 33 90 8 2 217 259 474 Mucor velutinosus LRR receptor-like serine/threonine-protein kinase RGI2 (RCH1_1), partial mRNA blastn 12636 172 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;