contig_metadata
5 rows where bioproject = "PRJNA600413" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 572759 | 572759 | PRJNA600413_P_NODE_104121_length_167_cov_0.864407_g103420_i0 | PRJNA600413 | 104121 | 167 | 0.864407 | 1.44355969 | Wilsoniana bliti | 642601 | SAR_Eukaryotes | SAR_Eukaryotes | 309 | 7.53e-80 | NTclustered | gi|599125656|gb|KF850480.1| | 642601 | g103420 | i0 | 100 | 99.125748502994 | 167 | 0 | 100 | 0 | 1 | 167 | 420 | 254 | Wilsoniana bliti isolate WR 01 cytochrome oxidase subunit 2 gene, partial cds; mitochondrial | blastn | 16554 | 309 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Wilsoniana | Wilsoniana bliti | ||
| 4400989 | 4400989 | PRJNA600413_P_NODE_140644_length_162_cov_0.902655_g139943_i0 | PRJNA600413 | 140644 | 162 | 0.902655 | 1.4623011 | Hyaloperonospora parasitica | 123356 | SAR_Eukaryotes | SAR_Eukaryotes | 183 | 4.58e-42 | NTclustered | gi|188030690|emb|CU694995.3| | 123356 | g139943 | i0 | 89.189 | 6.33950617283951 | 148 | 14 | 91 | 2 | 9 | 155 | 40760 | 40614 | H.parasitica DNA sequence from clone HpEmoy2-18B18, complete sequence | blastn | 1027 | 183 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora parasitica | ||
| 12054613 | 12054613 | PRJNA600413_P_NODE_96210_length_170_cov_1.685950_g95509_i0 | PRJNA600413 | 96210 | 170 | 1.68595 | 2.866115 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 58.4 | 3.06e-4 | NTclustered | gi|698796945|ref|XM_009833200.1| | 112090 | g95509 | i0 | 97.059 | 4.7 | 34 | 1 | 20 | 0 | 31 | 64 | 633 | 600 | Aphanomyces astaci hypothetical protein mRNA | blastn | 799 | 58.4 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 23526220 | 23526220 | PRJNA600413_P_NODE_25379_length_282_cov_1.081545_g24678_i0 | PRJNA600413 | 25379 | 282 | 1.081545 | 3.0499569 | Saprolegnia diclina | 112098 | SAR_Eukaryotes | SAR_Eukaryotes | 134 | 9.03e-27 | NTclustered | gi|669165645|ref|XM_008620163.1| | 1156394 | g24678 | i0 | 82.781 | 6.29432624113475 | 151 | 24 | 53 | 2 | 31 | 180 | 252 | 103 | Saprolegnia diclina VS20 caltractin mRNA | blastn | 1775 | 134 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia diclina | ||
| 31755005 | 31755005 | PRJNA600413_P_NODE_82797_length_178_cov_1.511628_g82096_i0 | PRJNA600413 | 82797 | 178 | 1.511628 | 2.69069784 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 64.7 | 2.33e-10 | NR | KAH9147093.1 | 100861 | g82096 | i0 | 53.4 | 3.91011235955056 | 58 | 27 | 97.8 | 0 | 4 | 177 | 70 | 127 | KAH9147093.1 hypothetical protein AeRB84_009211 [Aphanomyces euteiches] | diamond | 696 | 64.7 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;