RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA600413", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA600413 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26984928 26984928 PRJNA600413_P_NODE_43882_length_220_cov_1.175439_g43181_i0 PRJNA600413 43882 220 1.175439 2.5859658 Mitovirus sp. 2587224 Viruses Viruses 77.4 1.7e-14   NR WWU04548.1 2587224 g43181 i0 50 1.00909090909091 74 36 99.5 1 220 2 137 210 WWU04548.1 MAG: RNA-dependent RNA polymerase [Mitovirus sp.] diamond 222 77.4 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
29101068 29101068 PRJNA600413_P_NODE_60988_length_193_cov_1.895833_g60287_i0 PRJNA600413 60988 193 1.895833 3.65895769 Passion fruit mitovirus 1 3342389 Viruses Viruses 79.7 1.72e-15   NR XGD01531.1 3342389 g60287 i0 64.5 0.963730569948187 62 22 96.4 0 3 188 49 110 XGD01531.1 RNA-dependent RNA polymerase [Passion fruit mitovirus 1] diamond 186 79.7 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Passion fruit mitovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;