RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA600413" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA600413 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28406450 28406450 PRJNA600413_P_NODE_138826_length_162_cov_0.902655_g138125_i0 PRJNA600413 138826 162 0.902655 1.4623011 Ignavibacteria bacterium ADurb.Bin266 1852898 Bacteria Bacteria 80.9 3.89e-16   NR OQA66921.1 1852898 g138125 i0 74.5 1.88888888888889 51 13 94.4 0 9 161 25 75 OQA66921.1 MAG: hypothetical protein BWY38_01631 [Ignavibacteria bacterium ADurb.Bin266] diamond 306 80.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteria bacterium ADurb.Bin266
30743415 30743415 PRJNA600413_P_NODE_132714_length_163_cov_0.894737_g132013_i0 PRJNA600413 132714 163 0.894737 1.45842131 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 67 1.61e-11   NR HEY6435584.1 2651163 g132013 i0 63 0.993865030674847 54 20 99.4 0 1 162 60 113 HEY6435584.1 Bax inhibitor-1/YccA family protein [Ignavibacteriaceae bacterium] diamond 162 67 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;