RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA600413" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA600413 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6953359 6953359 PRJNA600413_P_NODE_8166_length_523_cov_1.411392_g7477_i0 PRJNA600413 8166 523 1.411392 7.38158016 Lytechinus pictus 7653 Echinodermata other_Eukaryota 527 6.99e-145   NTclustered gi|2707413054|ref|XM_064095901.1| 7653 g7477 i0 85.029 11.1950286806883 521 74 99 3 4 522 981 463 PREDICTED: Lytechinus pictus uncharacterized LOC135153334 (LOC135153334), mRNA blastn 5855 527 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
8228568 8228568 PRJNA600413_P_NODE_967_length_1368_cov_15.940864_g708_i0 PRJNA600413 967 1368 15.940864 218.07101952 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 293 2.67e-92   NR XP_041461829.1 7654 g708 i0 48.7 4.6030701754386 300 149 64.9 4 967 80 34 332 XP_041461829.1 craniofacial development protein 2-like [Lytechinus variegatus] diamond 6297 293 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
28659084 28659084 PRJNA600413_P_NODE_102627_length_167_cov_1.135593_g101926_i0 PRJNA600413 102627 167 1.135593 1.89644031 Diadema antillarum 105358 Echinodermata other_Eukaryota 41.2 0.0474   NR XP_071481743.1 105358 g101926 i0 56.3 0.574850299401198 32 14 57.5 0 146 51 489 520 XP_071481743.1 uncharacterized protein [Diadema antillarum] diamond 96 41.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
29038085 29038085 PRJNA600413_P_NODE_60948_length_193_cov_2.048611_g60247_i0 PRJNA600413 60948 193 2.048611 3.95381923 Lytechinus pictus 7653 Echinodermata other_Eukaryota 48.1 2.42e-4   NR XP_063951714.1 7653 g60247 i0 51.4 1.0880829015544 35 17 54.4 0 2 106 299 333 XP_063951714.1 uncharacterized protein LOC135153223 [Lytechinus pictus] diamond 210 48.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
29574380 29574380 PRJNA600413_P_NODE_89450_length_174_cov_1.432000_g88749_i0 PRJNA600413 89450 174 1.432 2.49168 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 76.3 2.21e-14   NR PIK34564.1 307972 g88749 i0 56.1 2.91379310344828 57 25 98.3 0 3 173 524 580 PIK34564.1 endonuclease-reverse transcriptase [Apostichopus japonicus] diamond 507 76.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus
31041366 31041366 PRJNA600413_P_NODE_2395_length_941_cov_11.031390_g1939_i0 PRJNA600413 2395 941 11.03139 103.8053799 Metazoa 33208 Echinodermata other_Eukaryota 300 5.77e-95   NR XP_041481845.1 7654 g1939 i0 50.9 4.74388947927736 289 138 91.2 3 937 80 1 288 XP_041481845.1 uncharacterized protein LOC121429016 [Lytechinus variegatus] diamond 4464 300 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32577792 32577792 PRJNA600413_P_NODE_18939_length_329_cov_1.457143_g18238_i0 PRJNA600413 18939 329 1.457143 4.79400047 Anneissia japonica 1529436 Echinodermata other_Eukaryota 54.7 6e-6   NR XP_033099741.1 1529436 g18238 i0 48.4 0.583586626139818 64 32 57.4 1 327 139 208 271 XP_033099741.1 uncharacterized protein LOC117103306, partial [Anneissia japonica] diamond 192 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
32748344 32748344 PRJNA600413_P_NODE_71640_length_185_cov_1.500000_g70939_i0 PRJNA600413 71640 185 1.5 2.775 root 1 Root_unresolved Root_unresolved 55.8 4.03e-7   NR XP_033116597.1 1529436 g70939 i0 49.1 2.70810810810811 55 28 89.2 0 6 170 114 168 XP_033116597.1 uncharacterized protein LOC117116632, partial [Anneissia japonica] diamond 501 56.2 0.99288256227758 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;