RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA600413" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA600413 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26763408 26763408 PRJNA600413_P_NODE_95781_length_170_cov_1.685950_g95080_i0 PRJNA600413 95781 170 1.68595 2.866115 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.4 0.0195   NR MBI2166623.1 2035772 g95080 i0 54.1 0.652941176470588 37 17 65.3 0 55 165 386 422 MBI2166623.1 VCBS repeat-containing protein [Candidatus Omnitrophota bacterium] diamond 111 42.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27427791 27427791 PRJNA600413_P_NODE_108663_length_166_cov_1.743590_g107962_i0 PRJNA600413 108663 166 1.74359 2.8943594 Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_ 2035772 Bacteria Bacteria 100 3.909999999999999e-23   NR OGX28652.1 1801860 g107962 i0 85.5 2.98192771084337 55 8 99.4 0 166 2 316 370 OGX28652.1 MAG: beta-ketoacyl-[acyl-carrier-protein] synthase II [Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20] diamond 495 100 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20
29227510 29227510 PRJNA600413_P_NODE_142129_length_162_cov_0.902655_g141428_i0 PRJNA600413 142129 162 0.902655 1.4623011 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 57 1.7e-8   NR HRK61703.1 2035772 g141428 i0 65.9 0.814814814814815 44 15 81.5 0 134 3 1 44 HRK61703.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 132 57 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29795466 29795466 PRJNA600413_P_NODE_77751_length_181_cov_1.545455_g77050_i0 PRJNA600413 77751 181 1.545455 2.79727355 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 79.7 1.36e-15   NR MCM8778537.1 2035772 g77050 i0 67.8 0.977900552486188 59 19 97.8 0 5 181 4 62 MCM8778537.1 HAMP domain-containing histidine kinase [Candidatus Omnitrophota bacterium] diamond 177 79.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29922090 29922090 PRJNA600413_P_NODE_140191_length_162_cov_0.902655_g139490_i0 PRJNA600413 140191 162 0.902655 1.4623011 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 65.5 1.07e-11   NR MBF0503745.1 2035772 g139490 i0 77.8 0.833333333333333 45 10 83.3 0 135 1 6 50 MBF0503745.1 pilin [Candidatus Omnitrophota bacterium] diamond 135 65.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31312177 31312177 PRJNA600413_P_NODE_129815_length_163_cov_1.789474_g129114_i0 PRJNA600413 129815 163 1.789474 2.91684262 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 41.6 0.0331   NR MCX5702120.1 2035772 g129114 i0 37.1 1.14110429447853 62 29 95.7 1 157 2 42 103 MCX5702120.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 186 41.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32261579 32261579 PRJNA600413_P_NODE_132558_length_163_cov_0.894737_g131857_i0 PRJNA600413 132558 163 0.894737 1.45842131 Omnitrophica bacterium RIFCSPHIGHO2_ 2035772 Bacteria Bacteria 74.7 3.86e-14   NR OGW87980.1 1801820 g131857 i0 65.4 0.957055214723926 52 18 95.7 0 157 2 161 212 OGW87980.1 MAG: hypothetical protein A3C35_08555 [Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_46_11] diamond 156 74.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_46_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;