RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA600413" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA600413 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26858810 26858810 PRJNA600413_P_NODE_91601_length_172_cov_3.105691_g90900_i0 PRJNA600413 91601 172 3.105691 5.34178852 Balneolales bacterium 2497613 Bacteria Bacteria 62.4 5.97e-10   NR MCH8495382.1 2497613 g90900 i0 52.6 0.994186046511628 57 27 99.4 0 1 171 38 94 MCH8495382.1 NAD-dependent DNA ligase LigA [Balneolales bacterium] diamond 171 62.4 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium
27680471 27680471 PRJNA600413_P_NODE_141664_length_162_cov_0.902655_g140963_i0 PRJNA600413 141664 162 0.902655 1.4623011 Balneolaceae bacterium 2053516 Bacteria Bacteria 69.3 5.03e-12   NR MFA5668890.1 2053516 g140963 i0 56.9 0.944444444444444 51 22 94.4 0 8 160 256 306 MFA5668890.1 aldehyde dehydrogenase [Balneolaceae bacterium] diamond 153 69.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
29542921 29542921 PRJNA600413_P_NODE_128110_length_164_cov_0.886957_g127409_i0 PRJNA600413 128110 164 0.886957 1.45460948 Balneolaceae bacterium 2053516 Bacteria Bacteria 59.3 1.81e-8   NR MBO6522269.1 2053516 g127409 i0 40.4 1.9390243902439 52 31 95.1 0 157 2 1026 1077 MBO6522269.1 ThuA domain-containing protein [Balneolaceae bacterium] diamond 318 59.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;