RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA600413", tax_kingdom = "Metazoa" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA600413 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27016588 27016588 PRJNA600413_P_NODE_9342_length_487_cov_1.141553_g8647_i0 PRJNA600413 9342 487 1.141553 5.55936311 Lineus longissimus 88925 Nemertea other_Eukaryota 55.1 1.24e-5   NR XP_064618966.1 88925 g8647 i0 50.8 0.363449691991786 59 26 34.5 1 316 483 1 59 XP_064618966.1 uncharacterized protein LOC135482648 [Lineus longissimus] diamond 177 55.1 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
27775044 27775044 PRJNA600413_P_NODE_142884_length_162_cov_0.902655_g142183_i0 PRJNA600413 142884 162 0.902655 1.4623011 Lineus longissimus 88925 Nemertea other_Eukaryota 70.5 4.66e-13   NR XP_064630852.1 88925 g142183 i0 61.2 2.72222222222222 49 19 90.7 0 160 14 96 144 XP_064630852.1 uncharacterized protein LOC135489404 [Lineus longissimus] diamond 441 70.5 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
32766496 32766496 PRJNA600413_P_NODE_56960_length_198_cov_2.906040_g56259_i0 PRJNA600413 56960 198 2.90604 5.7539592 Lineus longissimus 88925 Nemertea other_Eukaryota 57.8 3.15e-8   NR XP_064638302.1 88925 g56259 i0 78.8 0.5 33 7 50 0 99 197 9 41 XP_064638302.1 calcium-responsive transcription factor-like [Lineus longissimus] diamond 99 57.8 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;