RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA600413", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA600413 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3124408 3124408 PRJNA600413_P_NODE_145903_length_161_cov_0.910714_g145202_i0 PRJNA600413 145903 161 0.910714 1.46624954 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 113 6.050000000000001e-21   NTclustered gi|238617605|gb|FJ973380.1| 45107 g145202 i0 81.579 5.36024844720497 152 15 94 7 1 152 1867 1729 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 863 113 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
12053732 12053732 PRJNA600413_P_NODE_53270_length_204_cov_1.038710_g52569_i0 PRJNA600413 53270 204 1.03871 2.1189684 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 158 3.67e-34   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g52569 i0 81.863 1 204 21 99 14 1 202 3819 4008 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 204 158 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;