contig_metadata
13 rows where bioproject = "PRJNA600413", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 573404 | 573404 | PRJNA600413_P_NODE_148461_length_161_cov_0.910714_g147760_i0 | PRJNA600413 | 148461 | 161 | 0.910714 | 1.46624954 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 198 | 1.6199999999999999e-46 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g147760 | i0 | 88.957 | 1.67080745341615 | 163 | 14 | 100 | 4 | 1 | 161 | 5293998 | 5293838 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 269 | 198 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 1849204 | 1849204 | PRJNA600413_P_NODE_149842_length_161_cov_0.910714_g149141_i0 | PRJNA600413 | 149842 | 161 | 0.910714 | 1.46624954 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 57.4 | 8.19e-8 | NR | MEO6056204.1 | 2448054 | g149141 | i0 | 90.6 | 4.93788819875776 | 53 | 5 | 98.8 | 0 | 2 | 160 | 84 | 136 | MEO6056204.1 efflux RND transporter periplasmic adaptor subunit [Gemmatimonadales bacterium] | diamond | 795 | 57.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 3123757 | 3123757 | PRJNA600413_P_NODE_103423_length_167_cov_0.864407_g102722_i0 | PRJNA600413 | 103423 | 167 | 0.864407 | 1.44355969 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 99 | 1.77e-16 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g102722 | i0 | 86.667 | 0.538922155688623 | 90 | 10 | 53 | 2 | 58 | 146 | 88156 | 88068 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 90 | 99 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17150755 | 17150755 | PRJNA600413_P_NODE_126934_length_164_cov_0.886957_g126233_i0 | PRJNA600413 | 126934 | 164 | 0.886957 | 1.45460948 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 276 | 7.46e-70 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g126233 | i0 | 96.97 | 134.682926829268 | 165 | 3 | 100 | 2 | 1 | 164 | 421855 | 422018 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 22088 | 276 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 26826913 | 26826913 | PRJNA600413_P_NODE_73341_length_184_cov_1.511111_g72640_i0 | PRJNA600413 | 73341 | 184 | 1.511111 | 2.78044424 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 80.5 | 3.17e-16 | NR | HEU0299523.1 | 2029185 | g72640 | i0 | 60 | 0.978260869565217 | 60 | 24 | 97.8 | 0 | 182 | 3 | 83 | 142 | HEU0299523.1 hypothetical protein [Longimicrobium sp.] | diamond | 180 | 80.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 28879856 | 28879856 | PRJNA600413_P_NODE_112208_length_166_cov_0.871795_g111507_i0 | PRJNA600413 | 112208 | 166 | 0.871795 | 1.4471797 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 97.8 | 5.04e-22 | NR | HEU0078582.1 | 3047548 | g111507 | i0 | 92.6 | 0.975903614457831 | 54 | 4 | 97.6 | 0 | 164 | 3 | 200 | 253 | HEU0078582.1 hypothetical protein [Longimicrobiaceae bacterium] | diamond | 162 | 97.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 30301561 | 30301561 | PRJNA600413_P_NODE_97552_length_169_cov_1.800000_g96851_i0 | PRJNA600413 | 97552 | 169 | 1.8 | 3.042 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 41.6 | 0.0355 | NR | CAA9357409.1 | 246130 | g96851 | i0 | 50 | 1.02958579881657 | 58 | 23 | 95.9 | 3 | 4 | 165 | 161 | 216 | CAA9357409.1 MAG: Squalene synthase, partial [uncultured Gemmatimonadaceae bacterium] | diamond | 174 | 41.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 30819954 | 30819954 | PRJNA600413_P_NODE_102814_length_167_cov_0.864407_g102113_i0 | PRJNA600413 | 102814 | 167 | 0.864407 | 1.44355969 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 91.7 | 7.63e-20 | NR | MBC7788827.1 | 2026741 | g102113 | i0 | 78.4 | 1.90419161676647 | 51 | 11 | 91.6 | 0 | 163 | 11 | 302 | 352 | MBC7788827.1 ABC transporter permease [Gemmatimonadaceae bacterium] | diamond | 318 | 92 | 0.996739130434783 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31312173 | 31312173 | PRJNA600413_P_NODE_117095_length_165_cov_0.879310_g116394_i0 | PRJNA600413 | 117095 | 165 | 0.87931 | 1.4508615 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 79.3 | 1.6e-15 | NR | HYD51083.1 | 2026741 | g116394 | i0 | 68.5 | 0.981818181818182 | 54 | 17 | 98.2 | 0 | 164 | 3 | 733 | 786 | HYD51083.1 SusC/RagA family TonB-linked outer membrane protein [Gemmatimonadaceae bacterium] | diamond | 162 | 79.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31818242 | 31818242 | PRJNA600413_P_NODE_132277_length_163_cov_0.894737_g131576_i0 | PRJNA600413 | 132277 | 163 | 0.894737 | 1.45842131 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 82.4 | 1.32e-16 | NR | HWP36029.1 | 2448054 | g131576 | i0 | 64.2 | 0.975460122699387 | 53 | 19 | 97.5 | 0 | 4 | 162 | 164 | 216 | HWP36029.1 Druantia anti-phage system protein DruA [Gemmatimonadales bacterium] | diamond | 159 | 82.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 31944689 | 31944689 | PRJNA600413_P_NODE_129997_length_163_cov_1.789474_g129296_i0 | PRJNA600413 | 129997 | 163 | 1.789474 | 2.91684262 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 62.4 | 1.43e-10 | NR | HEV2130128.1 | 3047548 | g129296 | i0 | 54.7 | 1.95092024539877 | 53 | 24 | 97.5 | 0 | 5 | 163 | 26 | 78 | HEV2130128.1 nuclear transport factor 2 family protein [Longimicrobiaceae bacterium] | diamond | 318 | 62.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 32829621 | 32829621 | PRJNA600413_P_NODE_82480_length_178_cov_1.581395_g81779_i0 | PRJNA600413 | 82480 | 178 | 1.581395 | 2.8148831 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 69.7 | 2.98e-12 | NR | MDQ6831498.1 | 2026742 | g81779 | i0 | 50.9 | 0.960674157303371 | 57 | 28 | 96.1 | 0 | 7 | 177 | 192 | 248 | MDQ6831498.1 ParA family protein [Gemmatimonadota bacterium] | diamond | 171 | 69.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32861018 | 32861018 | PRJNA600413_P_NODE_84540_length_177_cov_1.343750_g83839_i0 | PRJNA600413 | 84540 | 177 | 1.34375 | 2.3784375 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 77.8 | 6.93e-15 | NR | MEZ4415771.1 | 2026742 | g83839 | i0 | 67.8 | 1 | 59 | 19 | 100 | 0 | 1 | 177 | 536 | 594 | MEZ4415771.1 amidohydrolase family protein [Gemmatimonadota bacterium] | diamond | 177 | 77.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;