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contig_metadata

4 rows where bioproject = "PRJNA600413", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA600413 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28216636 28216636 PRJNA600413_P_NODE_104266_length_167_cov_0.864407_g103565_i0 PRJNA600413 104266 167 0.864407 1.44355969 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 73.2 1.32e-13   NR MBI3121606.1 2072417 g103565 i0 65.5 4.90419161676647 55 16 93.4 1 12 167 163 217 MBI3121606.1 sigma-54-dependent Fis family transcriptional regulator [Candidatus Methylomirabilota bacterium] diamond 819 73.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28374709 28374709 PRJNA600413_P_NODE_135986_length_163_cov_0.894737_g135285_i0 PRJNA600413 135986 163 0.894737 1.45842131 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 111 5.2e-27   NR HEX3178060.1 2072417 g135285 i0 90.6 0.975460122699387 53 5 97.5 0 161 3 508 560 HEX3178060.1 ABC transporter substrate-binding protein [Candidatus Methylomirabilota bacterium] diamond 159 111 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30553692 30553692 PRJNA600413_P_NODE_138653_length_162_cov_0.902655_g137952_i0 PRJNA600413 138653 162 0.902655 1.4623011 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 63.9 7.71e-11   NR HEV8676533.1 2072417 g137952 i0 64.7 0.944444444444444 51 18 94.4 0 160 8 68 118 HEV8676533.1 CBS domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 153 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31863065 31863065 PRJNA600413_P_NODE_114377_length_166_cov_0.871795_g113676_i0 PRJNA600413 114377 166 0.871795 1.4471797 Pseudomonadati 3379134 Bacteria Bacteria 103 1.06e-24   NR HYA97376.1 2072417 g113676 i0 84.3 4.62650602409639 51 8 92.2 0 2 154 280 330 HYA97376.1 galactose-1-phosphate uridylyltransferase [Candidatus Methylomirabilota bacterium] diamond 768 103 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;