RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA600413", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA600413 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31407284 31407284 PRJNA600413_P_NODE_99856_length_168_cov_1.714286_g99155_i0 PRJNA600413 99856 168 1.714286 2.88000048 Candidatus Aminicenantes bacterium RBG_13_63_1 2052149 Bacteria Bacteria 58.5 1.94e-8   NR OGD25608.1 1797270 g99155 i0 52 1.80357142857143 50 24 89.3 0 5 154 47 96 OGD25608.1 MAG: hypothetical protein A2Y56_03875 [Candidatus Aminicenantes bacterium RBG_13_63_10] diamond 303 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium RBG_13_63_10
32071434 32071434 PRJNA600413_P_NODE_89058_length_174_cov_1.632000_g88357_i0 PRJNA600413 89058 174 1.632 2.83968 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 44.3 0.00417   NR MBM3295017.1 2052149 g88357 i0 40 0.948275862068966 55 33 94.8 0 6 170 138 192 MBM3295017.1 hypothetical protein [Candidatus Aminicenantes bacterium] diamond 165 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;