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contig_metadata

23 rows where bioproject = "PRJNA599208" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA599208 · 23 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
572248 572248 PRJNA599208_P_NODE_4161_length_409_cov_8.287634_g3967_i0 PRJNA599208 4161 409 8.287634 33.89642306 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 728 0   NTclustered gi|10782|emb|X54004.1| 5908 g3967 i0 98.778 99.838630806846 409 5 100 0 1 409 1460 1868 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 40834 728 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
4399830 4399830 PRJNA599208_P_NODE_10744_length_205_cov_1.166667_g10548_i0 PRJNA599208 10744 205 1.166667 2.39166735 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 361 2.62e-95   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g10548 i0 98.529 95.6536585365854 204 3 99 0 2 205 138 341 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 19609 361 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
4399839 4399839 PRJNA599208_P_NODE_11564_length_193_cov_9.820513_g11368_i0 PRJNA599208 11564 193 9.820513 18.95359009 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 246 7.11e-61   NTclustered gi|11466252|ref|NC_000862.1| 5908 g11368 i0 90.155 10.8497409326425 193 13 99 6 3 193 32530 32342 Tetrahymena pyriformis mitochondrion, complete genome blastn 2094 246 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
4399917 4399917 PRJNA599208_P_NODE_3624_length_447_cov_6.080488_g3430_i0 PRJNA599208 3624 447 6.080488 27.17978136 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 737 0   NTclustered gi|512134942|gb|JX178901.1| 1295638 g3430 i0 96.429 93.1364653243848 448 15 100 1 1 447 1181 1628 Vorticella sp. 4 JG-2011 clone 1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 41632 737 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
5676002 5676002 PRJNA599208_P_NODE_6445_length_298_cov_3.199234_g6249_i0 PRJNA599208 6445 298 3.199234 9.53371732 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 545 1.04e-150   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g6249 i0 99.664 92.8859060402685 298 1 100 0 1 298 1806 1509 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 27680 545 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
6950410 6950410 PRJNA599208_P_NODE_10666_length_206_cov_1.384615_g10470_i0 PRJNA599208 10666 206 1.384615 2.8523069 Stentor roeselii 1703786 SAR_Eukaryotes SAR_Eukaryotes 364 2.0399999999999993e-96   NTclustered gi|921061859|gb|KP970274.1| 1703786 g10470 i0 98.544 66.4368932038835 206 3 100 0 1 206 298 93 Stentor roeselii isolate STR large subunit ribosomal RNA gene, partial sequence blastn 13686 364 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor roeselii
9500616 9500616 PRJNA599208_P_NODE_10608_length_207_cov_1.388235_g10412_i0 PRJNA599208 10608 207 1.388235 2.87364645 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 294 2.73e-75   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g10412 i0 92.308 6.29468599033816 208 14 100 2 1 207 115 321 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1303 294 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9500626 9500626 PRJNA599208_P_NODE_11828_length_191_cov_0.961039_g11632_i0 PRJNA599208 11828 191 0.961039 1.83558449 Tetrahymena nigricans 2704176 SAR_Eukaryotes SAR_Eukaryotes 353 4.02e-93   NTclustered gi|2082965251|gb|MZ827091.1| 2704176 g11632 i0 100 45.0628272251309 191 0 100 0 1 191 714 524 Tetrahymena nigricans isolate VB57 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8607 353 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena nigricans
11344811 11344811 PRJNA599208_P_NODE_2349_length_589_cov_4.947464_g2169_i0 PRJNA599208 2349 589 4.947464 29.14056296 Dysteriida 238898 SAR_Eukaryotes SAR_Eukaryotes 479 2.249999999999999e-130   NTclustered gi|558697265|gb|KC832960.1| 247150 g2169 i0 87.77 65.8505942275042 417 42 70 8 161 572 415 3 Dysteria derouxi 28S ribosomal RNA gene, partial sequence blastn 38786 479 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Dysteriidae Dysteria Dysteria derouxi
12051463 12051463 PRJNA599208_P_NODE_7170_length_277_cov_2.625000_g6974_i0 PRJNA599208 7170 277 2.625 7.27125 Planilamina ovata 2684848 SAR_Eukaryotes SAR_Eukaryotes 424 4.69e-114   NTclustered gi|1784308423|gb|MN830171.1| 2684848 g6974 i0 94.224 7.60649819494585 277 16 100 0 1 277 1473 1749 Planilamina ovata isolate LJ-II-20170502 large subunit ribosomal RNA gene, partial sequence blastn 2107 424 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Kyaroikeidae Planilamina Planilamina ovata
13326191 13326191 PRJNA599208_P_NODE_2451_length_574_cov_10.696462_g2269_i0 PRJNA599208 2451 574 10.696462 61.397691880000004 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 850 0   NTclustered gi|114329902|ref|NC_008339.1| 5907 g2269 i0 93.684 69.5261324041812 570 33 99 2 1 570 1297 1863 Tetrahymena pigmentosa mitochondrion, complete genome blastn 39908 850 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
13895515 13895515 PRJNA599208_P_NODE_4491_length_389_cov_2.565341_g4296_i0 PRJNA599208 4491 389 2.565341 9.97917649 Helicoprorodontidae 1607782 SAR_Eukaryotes SAR_Eukaryotes 143 2.14e-29   NTclustered gi|375305434|gb|JF975394.1| 652932 g4296 i0 91.346 28.3933161953728 104 9 27 0 160 263 309 206 Trachelotractus entzi isolate LWW07033111 28S ribosomal RNA gene, partial sequence blastn 11045 143 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida   Trachelotractus Trachelotractus entzi
15874916 15874916 PRJNA599208_P_NODE_12493_length_183_cov_2.205479_g12297_i0 PRJNA599208 12493 183 2.205479 4.03602657 Epistylis cambari 3044357 SAR_Eukaryotes SAR_Eukaryotes 130 7e-26   NTclustered gi|2500396601|gb|OQ924985.1| 3044357 g12297 i0 79.781 2.69398907103825 183 34 99 3 2 182 561 380 Epistylis cambari isolate WT2021061102 large subunit ribosomal RNA gene, partial sequence blastn 493 130 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Epistylis Epistylis cambari
15874935 15874935 PRJNA599208_P_NODE_13873_length_170_cov_2.120301_g13677_i0 PRJNA599208 13873 170 2.120301 3.6045117 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 191 2.89e-44   NTclustered gi|111035908|emb|AJ781085.1| 35100 g13677 i0 87.059 9.61176470588235 170 21 100 1 1 170 484 652 Cyclidium glaucoma partial 23S rRNA gene, clone TH14 blastn 1634 191 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
16444227 16444227 PRJNA599208_P_NODE_13613_length_172_cov_11.962963_g13417_i0 PRJNA599208 13613 172 11.962963 20.57629636 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 292 7.81e-75   NTclustered gi|2001232597|gb|MW727190.1| 5897 g13417 i0 98.204 97.3139534883721 167 3 97 0 5 171 148 314 Tetrahymena elliotti isolate Maine201809-7-L2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence; macronuclear blastn 16738 294 0.993197278911565 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena elliotti
17149848 17149848 PRJNA599208_P_NODE_1814_length_693_cov_21.024390_g1660_i0 PRJNA599208 1814 693 21.02439 145.6990227 Tetrahymena chironomi 3034767 SAR_Eukaryotes SAR_Eukaryotes 1214 0   NTclustered gi|2459327221|gb|OQ626840.1| 3034767 g1660 i0 98.268 72.4126984126984 693 12 100 0 1 693 1158 466 Tetrahymena chironomi isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 50182 1214 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena chironomi
18424238 18424238 PRJNA599208_P_NODE_595_length_1342_cov_8.842146_g531_i0 PRJNA599208 595 1342 8.842146 118.66159932 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 1618 0   NTclustered gi|114329902|ref|NC_008339.1| 5907 g531 i0 88.517 60.0961251862891 1376 107 99 22 2 1337 33651 32287 Tetrahymena pigmentosa mitochondrion, complete genome blastn 80649 1618 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
19698791 19698791 PRJNA599208_P_NODE_6276_length_304_cov_2.475655_g6080_i0 PRJNA599208 6276 304 2.475655 7.5259912 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 318 2.53e-82   NTclustered gi|114329902|ref|NC_008339.1| 5907 g6080 i0 97.326 17.3322368421053 187 5 97 0 1 187 1976 2162 Tetrahymena pigmentosa mitochondrion, complete genome blastn 5269 318 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
20267969 20267969 PRJNA599208_P_NODE_6096_length_311_cov_2.408759_g5900_i0 PRJNA599208 6096 311 2.408759 7.49124049 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 159 1.66e-34   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5900 i0 95.918 0.945337620578778 98 4 32 0 1 98 2985 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 294 159 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20974502 20974502 PRJNA599208_P_NODE_15817_length_156_cov_1.075630_g15621_i0 PRJNA599208 15817 156 1.07563 1.6779828 Dileptus sp. FG-2015 1607875 SAR_Eukaryotes SAR_Eukaryotes 283 4.1899999999999994e-72   NTclustered gi|759083535|gb|KM222152.1| 1607875 g15621 i0 99.359 100.237179487179 156 1 100 0 1 156 177 332 Dileptus sp. FG-2015 voucher PHB09033001 large subunit ribosomal RNA gene, partial sequence blastn 15637 283 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Dileptidae Dileptus Dileptus sp. FG-2015
22249334 22249334 PRJNA599208_P_NODE_14118_length_168_cov_2.358779_g13922_i0 PRJNA599208 14118 168 2.358779 3.96274872 Cryptocaryon irritans 153251 SAR_Eukaryotes SAR_Eukaryotes 104 3.84e-18   NTclustered gi|1004125725|gb|KU761582.1| 153251 g13922 i0 91.892 0.880952380952381 74 6 44 0 7 80 120 47 Cryptocaryon irritans isolate ND1410 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and intergenic spacer, complete sequence blastn 148 104 1 Eukaryota Sar   Ciliophora       Cryptocaryon Cryptocaryon irritans
22249409 22249409 PRJNA599208_P_NODE_6218_length_306_cov_5.382900_g6022_i0 PRJNA599208 6218 306 5.3829 16.471674 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 547 2.9899999999999992e-151   NTclustered gi|10782|emb|X54004.1| 5908 g6022 i0 99.02 51.7058823529412 306 2 100 1 1 306 2988 3292 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 15822 547 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
23524634 23524634 PRJNA599208_P_NODE_3919_length_425_cov_8.729381_g3725_i0 PRJNA599208 3919 425 8.729381 37.09986925 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 684 0   NTclustered gi|114329902|ref|NC_008339.1| 5907 g3725 i0 95.785 39.9317647058824 427 13 100 5 1 425 2442 2865 Tetrahymena pigmentosa mitochondrion, complete genome blastn 16971 684 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;