contig_metadata
14 rows where bioproject = "PRJNA599208", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2416740 | 2416740 | PRJNA599208_P_NODE_10542_length_208_cov_1.415205_g10346_i0 | PRJNA599208 | 10542 | 208 | 1.415205 | 2.9436264 | Bacteria | 2 | Bacteria | Bacteria | 93.5 | 1.07e-14 | NTclustered | gi|76574296|gb|DQ139444.1| | 171953 | g10346 | i0 | 82.857 | 3.49038461538462 | 105 | 16 | 50 | 2 | 40 | 144 | 1509 | 1407 | Uncultured Acidobacteria bacterium clone CAL5 23S ribosomal RNA gene, partial sequence | blastn | 726 | 93.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 3692994 | 3692994 | PRJNA599208_P_NODE_923_length_1049_cov_18.183794_g834_i0 | PRJNA599208 | 923 | 1049 | 18.183794 | 190.74799906 | Bacteria | 2 | Bacteria | Bacteria | 1022 | 0 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g834 | i0 | 86.947 | 168.183031458532 | 927 | 99 | 88 | 21 | 132 | 1049 | 3299573 | 3298660 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 176424 | 1022 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 8225401 | 8225401 | PRJNA599208_P_NODE_2227_length_606_cov_24.249561_g2054_i0 | PRJNA599208 | 2227 | 606 | 24.249561 | 146.95233966 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 710 | 0 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g2054 | i0 | 87.805 | 109.155115511551 | 615 | 63 | 100 | 8 | 1 | 606 | 1821537 | 1822148 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 66148 | 710 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 9500646 | 9500646 | PRJNA599208_P_NODE_13988_length_169_cov_2.469697_g13792_i0 | PRJNA599208 | 13988 | 169 | 2.469697 | 4.17378793 | uncultured Holophaga sp. | 188475 | Bacteria | Bacteria | 228 | 2.179999999999999e-55 | NTclustered | gi|2621785467|emb|OY781925.1| | 188475 | g13792 | i0 | 91.124 | 191.337278106509 | 169 | 13 | 99 | 2 | 2 | 169 | 1837173 | 1837340 | MAG: uncultured Holophaga sp. isolate 48fd71e5-2ffc-43bf-b6f5-ca4e00a42c30 genome assembly, chromosome: 1 | blastn | 32336 | 228 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Holophaga | uncultured Holophaga sp. | ||
| 10070106 | 10070106 | PRJNA599208_P_NODE_7428_length_270_cov_3.098712_g7232_i0 | PRJNA599208 | 7428 | 270 | 3.098712 | 8.3665224 | Chloracidobacterium | 458032 | Bacteria | Bacteria | 143 | 1.43e-29 | NTclustered | gi|470487921|ref|NR_076842.1| | 458033 | g7232 | i0 | 82.635 | 8.85925925925926 | 167 | 23 | 61 | 6 | 1 | 164 | 500 | 337 | Chloracidobacterium thermophilum strain B 23S ribosomal RNA, complete sequence | blastn | 2392 | 143 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Chloracidobacterium | Chloracidobacterium thermophilum | ||
| 10776483 | 10776483 | PRJNA599208_P_NODE_14029_length_169_cov_1.477273_g13833_i0 | PRJNA599208 | 14029 | 169 | 1.477273 | 2.49659137 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 302 | 1.27e-77 | NTclustered | gi|76574288|gb|DQ139436.1| | 171953 | g13833 | i0 | 98.817 | 66.7514792899408 | 169 | 2 | 100 | 0 | 1 | 169 | 187 | 19 | Uncultured Acidobacteria bacterium clone CAL6 23S ribosomal RNA gene, partial sequence | blastn | 11281 | 302 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 12051465 | 12051465 | PRJNA599208_P_NODE_7270_length_274_cov_4.308017_g7074_i0 | PRJNA599208 | 7270 | 274 | 4.308017 | 11.80396658 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 355 | 1.7099999999999997e-93 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g7074 | i0 | 90.706 | 146.284671532847 | 269 | 22 | 98 | 3 | 1 | 269 | 3556711 | 3556446 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 40082 | 355 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 15874943 | 15874943 | PRJNA599208_P_NODE_14533_length_165_cov_2.023438_g14337_i0 | PRJNA599208 | 14533 | 165 | 2.023438 | 3.3386727 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 289 | 9.66e-74 | NTclustered | gi|317120511|gb|HQ010189.1| | 171953 | g14337 | i0 | 99.371 | 97.8545454545455 | 159 | 1 | 96 | 0 | 7 | 165 | 163 | 5 | Uncultured Acidobacteria bacterium clone Amr1_A2 16S ribosomal RNA gene, partial sequence | blastn | 16146 | 289 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 16444307 | 16444307 | PRJNA599208_P_NODE_8233_length_250_cov_2.549296_g8037_i0 | PRJNA599208 | 8233 | 250 | 2.549296 | 6.37324 | Bacteria | 2 | Bacteria | Bacteria | 370 | 5.499999999999999e-98 | NTclustered | gi|2874253862|emb|OY969918.1| | 171953 | g8037 | i0 | 93.333 | 98.308 | 255 | 10 | 100 | 4 | 1 | 250 | 2908356 | 2908104 | MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.4 genome assembly, chromosome: 1 | blastn | 24577 | 370 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 17149919 | 17149919 | PRJNA599208_P_NODE_7434_length_270_cov_2.429185_g7238_i0 | PRJNA599208 | 7434 | 270 | 2.429185 | 6.5587995 | Acidisarcina polymorpha | 2211140 | Bacteria | Bacteria | 460 | 3.4699999999999996e-125 | NTclustered | gi|1431854037|gb|CP030840.1| | 2211140 | g7238 | i0 | 97.407 | 104.559259259259 | 270 | 7 | 100 | 0 | 1 | 270 | 1122636 | 1122367 | Acidisarcina polymorpha strain SBC82 chromosome, complete genome | blastn | 28231 | 460 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidisarcina | Acidisarcina polymorpha | ||
| 17719326 | 17719326 | PRJNA599208_P_NODE_3314_length_475_cov_3.420091_g3120_i0 | PRJNA599208 | 3314 | 475 | 3.420091 | 16.24543225 | Bacteria | 2 | Bacteria | Bacteria | 472 | 2.99e-128 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g3120 | i0 | 85.408 | 301.616842105263 | 466 | 54 | 97 | 8 | 16 | 475 | 4232759 | 4233216 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 143268 | 472 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 20267913 | 20267913 | PRJNA599208_P_NODE_16776_length_150_cov_1.353982_g16580_i0 | PRJNA599208 | 16776 | 150 | 1.353982 | 2.030973 | Bacteria | 2 | Bacteria | Bacteria | 243 | 6.75e-60 | NTclustered | gi|2874254167|emb|OY970399.1| | 171953 | g16580 | i0 | 95.973 | 241.813333333333 | 149 | 6 | 99 | 0 | 2 | 150 | 2285200 | 2285052 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.6 genome assembly, chromosome: 1 | blastn | 36272 | 244 | 0.995901639344262 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 22249318 | 22249318 | PRJNA599208_P_NODE_12378_length_184_cov_2.503401_g12182_i0 | PRJNA599208 | 12378 | 184 | 2.503401 | 4.60625784 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 291 | 3.05e-74 | NTclustered | gi|76574291|gb|DQ139439.1| | 171953 | g12182 | i0 | 95.58 | 134.755434782609 | 181 | 8 | 98 | 0 | 2 | 182 | 1154 | 1334 | Uncultured Acidobacteria bacterium clone CAL9 23S ribosomal RNA gene, partial sequence | blastn | 24795 | 291 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 28311700 | 28311700 | PRJNA599208_P_NODE_9266_length_229_cov_1.364583_g9070_i0 | PRJNA599208 | 9266 | 229 | 1.364583 | 3.12489507 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 120 | 2.0299999999999997e-31 | NR | MET0168239.1 | 2910147 | g9070 | i0 | 65.3 | 2.94759825327511 | 75 | 26 | 98.3 | 0 | 3 | 227 | 202 | 276 | MET0168239.1 LysR family transcriptional regulator [Vicinamibacterales bacterium] | diamond | 675 | 120 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;