RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA599208", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA599208 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3692895 3692895 PRJNA599208_P_NODE_11583_length_193_cov_2.974359_g11387_i0 PRJNA599208 11583 193 2.974359 5.74051287 Metazoa 33208 Rotifera other_Eukaryota 357 3.1499999999999996e-94   NTclustered gi|37785582|gb|AY210469.1| 96448 g11387 i0 100 68.4507772020725 193 0 100 0 1 193 1612 1804 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 13211 357 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
5676045 5676045 PRJNA599208_P_NODE_9865_length_218_cov_2.110497_g9669_i0 PRJNA599208 9865 218 2.110497 4.60088346 Ascomorpha ovalis 360655 Rotifera other_Eukaryota 200 6.4999999999999985e-47   NTclustered gi|83285183|gb|DQ297730.1| 360655 g9669 i0 83.562 2.0045871559633 219 31 99 5 1 217 724 509 Ascomorpha ovalis 28S ribosomal RNA gene, partial sequence blastn 437 200 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
9500628 9500628 PRJNA599208_P_NODE_12048_length_188_cov_1.549669_g11852_i0 PRJNA599208 12048 188 1.549669 2.91337772 Adineta vaga 104782 Rotifera other_Eukaryota 315 1.8599999999999999e-81   NTclustered gi|37788192|gb|AY218145.1| 104782 g11852 i0 96.809 89.7446808510638 188 6 100 0 1 188 307 120 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 16872 315 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
15874973 15874973 PRJNA599208_P_NODE_16773_length_150_cov_1.362832_g16577_i0 PRJNA599208 16773 150 1.362832 2.044248 Ascomorpha ovalis 360655 Rotifera other_Eukaryota 206 8.86e-49   NTclustered gi|83285183|gb|DQ297730.1| 360655 g16577 i0 91.333 10.8133333333333 150 13 100 0 1 150 455 604 Ascomorpha ovalis 28S ribosomal RNA gene, partial sequence blastn 1622 206 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
16444231 16444231 PRJNA599208_P_NODE_14413_length_166_cov_2.155039_g14217_i0 PRJNA599208 14413 166 2.155039 3.57736474 Adineta 104781 Rotifera other_Eukaryota 302 1.2500000000000001e-77   NTclustered gi|1005055598|gb|KU860741.1| 1813167 g14217 i0 99.398 49.0361445783133 166 1 100 0 1 166 2053 1888 Adineta vaga complex sp. D JFF-2016 isolate H3-14b 28S ribosomal RNA gene, partial sequence blastn 8140 302 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. D JFF-2016
18424112 18424112 PRJNA599208_P_NODE_10455_length_209_cov_1.581395_g10259_i0 PRJNA599208 10455 209 1.581395 3.30511555 Adineta vaga 104782 Rotifera other_Eukaryota 364 2.0699999999999992e-96   NTclustered gi|72153731|gb|DQ089739.1| 104782 g10259 i0 98.086 12.9425837320574 209 4 100 0 1 209 2404 2612 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 2705 364 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
18992930 18992930 PRJNA599208_P_NODE_8795_length_238_cov_1.313433_g8599_i0 PRJNA599208 8795 238 1.313433 3.12597054 Eurotatoria 2816136 Rotifera other_Eukaryota 440 3.899999999999999e-119   NTclustered gi|2537903787|gb|KM043252.2| 104782 g8599 i0 100 95.9327731092437 238 0 100 0 1 238 55 292 Adineta vaga voucher AD005 18S ribosomal RNA gene, partial sequence blastn 22832 440 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
22249344 22249344 PRJNA599208_P_NODE_15318_length_159_cov_1.704918_g15122_i0 PRJNA599208 15318 159 1.704918 2.71081962 Encentrum tectipes 360662 Rotifera other_Eukaryota 239 9.42e-59   NTclustered gi|83285187|gb|DQ297734.1| 360662 g15122 i0 93.75 62.6729559748428 160 8 100 2 1 159 743 901 Encentrum tectipes 28S ribosomal RNA gene, partial sequence blastn 9965 239 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Dicranophoridae Encentrum Encentrum tectipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;