RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA599208", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA599208 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3123110 3123110 PRJNA599208_P_NODE_10243_length_212_cov_3.337143_g10047_i0 PRJNA599208 10243 212 3.337143 7.07474316 Ephydatia fluviatilis 31330 Porifera other_Eukaryota 387 4.5e-103   NTclustered gi|2268710978|emb|OX176771.1| 31330 g10047 i0 99.528 3.41037735849057 212 1 100 0 1 212 855 644 Ephydatia fluviatilis partial 28S rRNA gene blastn 723 387 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Spongillida Spongillidae Ephydatia Ephydatia fluviatilis
28248267 28248267 PRJNA599208_P_NODE_9166_length_231_cov_1.113402_g8970_i0 PRJNA599208 9166 231 1.113402 2.57195862 Halichondria panicea 6063 Porifera other_Eukaryota 47.8 5.43e-4   NR XP_064399415.1 6063 g8970 i0 42.4 0.766233766233766 59 31 76.6 1 5 181 571 626 XP_064399415.1 uncharacterized protein LOC135345895 [Halichondria panicea] diamond 177 47.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;