RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA599208", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA599208 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19698757 19698757 PRJNA599208_P_NODE_3076_length_496_cov_12.124183_g2885_i0 PRJNA599208 3076 496 12.124183 60.13594768 Metaleptophallus sp. ZR20 3035858 Platyhelminthes Platyhelminthes 75 1.03e-8   NTclustered gi|2463134910|gb|OQ672261.1| 3035858 g2885 i0 85.915 6.29233870967742 71 8 14 2 149 218 282 213 Metaleptophallus sp. ZR20 large subunit ribosomal RNA gene, partial sequence blastn 3121 75 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Plagiorchiidae Metaleptophallus Metaleptophallus sp. ZR20
22818623 22818623 PRJNA599208_P_NODE_15178_length_160_cov_1.845528_g14982_i0 PRJNA599208 15178 160 1.845528 2.9528448 Metazoa 33208 Platyhelminthes Platyhelminthes 65.8 1.7e-6   NTclustered gi|28273264|gb|AY157152.1| 104925 g14982 i0 93.182 24.05 44 3 28 0 78 121 1880 1837 Catenula sp. Lake Madgwick 28S large subunit ribosomal RNA gene, partial sequence blastn 3848 65.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Catenulidae Catenula Catenula sp. Lake Madgwick

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;