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contig_metadata

19 rows where bioproject = "PRJNA599208" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 19 ✖

bioproject 1

  • PRJNA599208 · 19 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
572198 572198 PRJNA599208_P_NODE_15861_length_155_cov_3.025424_g15665_i0 PRJNA599208 15861 155 3.025424 4.6894072 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 287 3.21e-73   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g15665 i0 100 67.2 155 0 100 0 1 155 2344 2498 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 10416 287 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
1848050 1848050 PRJNA599208_P_NODE_7762_length_261_cov_2.321429_g7566_i0 PRJNA599208 7762 261 2.321429 6.05892969 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 477 3.3099999999999986e-130   NTclustered gi|1803019516|gb|MT007902.1| 56466 g7566 i0 99.617 6.4367816091954 261 1 100 0 1 261 830 1090 Peranema trichophorum isolate PP8 small subunit ribosomal RNA gene, partial sequence blastn 1680 477 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
3123197 3123197 PRJNA599208_P_NODE_3863_length_429_cov_3.931122_g3669_i0 PRJNA599208 3863 429 3.931122 16.864513380000002 uncultured kinetoplastid 204529 Euglenozoa other_Eukaryota 521 2.6199999999999995e-143   NTclustered gi|363903324|gb|JN542574.1| 204529 g3669 i0 92 88.2657342657343 375 25 87 5 1 372 868 1240 Uncultured kinetoplastid clone Kryos_IF_C10 18S ribosomal RNA gene, partial sequence blastn 37866 521 1 Eukaryota Discoba   Euglenozoa Kinetoplastea       uncultured kinetoplastid
4969525 4969525 PRJNA599208_P_NODE_10604_length_207_cov_1.564706_g10408_i0 PRJNA599208 10604 207 1.564706 3.23894142 Rhynchomonas 127149 Euglenozoa other_Eukaryota 270 4.59e-68   NTclustered gi|1996609220|gb|MW694339.1| 127150 g10408 i0 90.338 88.8212560386473 207 18 100 2 1 207 125 329 Rhynchomonas nasuta isolate G431 small subunit ribosomal RNA gene, partial sequence blastn 18386 270 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
5675906 5675906 PRJNA599208_P_NODE_12865_length_180_cov_1.062937_g12669_i0 PRJNA599208 12865 180 1.062937 1.9132866 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 276 8.320000000000001e-70   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g12669 i0 94.444 2.98888888888889 180 9 99 1 1 179 3731 3910 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 538 276 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
6950405 6950405 PRJNA599208_P_NODE_1026_length_974_cov_11.304162_g929_i0 PRJNA599208 1026 974 11.304162 110.10253788 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 1552 0   NTclustered gi|27461806|gb|AY130826.1| 56466 g929 i0 96.688 1.55852156057495 936 26 96 4 42 974 1 934 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 1518 1552 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
8225437 8225437 PRJNA599208_P_NODE_4707_length_374_cov_5.050445_g4512_i0 PRJNA599208 4707 374 5.050445 18.8886643 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 562 1.33e-155   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4512 i0 94.766 29.628342245989305 363 15 96 3 1 359 2520 2882 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 11081 562 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9500654 9500654 PRJNA599208_P_NODE_14608_length_164_cov_3.362205_g14412_i0 PRJNA599208 14608 164 3.362205 5.5140162 Trachelomonas sp. Jakeun081409A 1685811 Euglenozoa other_Eukaryota 303 3.42e-78   NTclustered gi|944273534|gb|KT304869.1| 1685811 g14412 i0 100 12.75 164 0 100 0 1 164 145 308 Trachelomonas sp. Jakeun081409A small subunit ribosomal RNA gene, partial sequence blastn 2091 303 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas sp. Jakeun081409A
11344874 11344874 PRJNA599208_P_NODE_9269_length_229_cov_1.265625_g9073_i0 PRJNA599208 9269 229 1.265625 2.89828125 Naegleria 5761 Heterolobosea other_Eukaryota 412 8.13e-111   NTclustered gi|32966202|gb|AY266314.1| 5762 g9073 i0 99.127 99.9606986899563 229 2 100 0 1 229 487 259 Naegleria gruberi 18S ribosomal RNA gene, partial sequence blastn 22891 412 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13326164 13326164 PRJNA599208_P_NODE_1571_length_752_cov_3.549650_g1431_i0 PRJNA599208 1571 752 3.54965 26.693368 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 833 0   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g1431 i0 86.675 6.42420212765957 758 93 100 8 1 752 1494 739 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 4831 833 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
14601162 14601162 PRJNA599208_P_NODE_5272_length_346_cov_2.388350_g5076_i0 PRJNA599208 5272 346 2.38835 8.263691 Zelonia costaricensis 372075 Euglenozoa other_Eukaryota 411 4.689999999999999e-110   NTclustered gi|1002342154|gb|KT944304.1| 372075 g5076 i0 88.136 131.147398843931 354 31 100 9 1 346 1379 1729 Zelonia costaricensis strain 15EC 28S ribosomal RNA gene, partial sequence blastn 45377 411 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Zelonia Zelonia costaricensis
15875046 15875046 PRJNA599208_P_NODE_6973_length_283_cov_2.638211_g6777_i0 PRJNA599208 6973 283 2.638211 7.46613713 Parafumarolamoeba stagnalis 2872509 Heterolobosea other_Eukaryota 348 2.97e-91   NTclustered gi|2086087549|gb|MZ919148.1| 2872509 g6777 i0 88.811 3.03886925795053 286 29 100 3 1 283 561 846 Parafumarolamoeba stagnalis small subunit ribosomal RNA gene, partial sequence blastn 860 348 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Parafumarolamoeba Parafumarolamoeba stagnalis
17719303 17719303 PRJNA599208_P_NODE_16514_length_151_cov_2.631579_g16318_i0 PRJNA599208 16514 151 2.631579 3.97368429 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 122 9.26e-24   NTclustered gi|2414483|emb|Y00055.1| 5656 g16318 i0 98.551 56.8543046357616 69 1 46 0 1 69 7468 7400 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 8585 122 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
19698762 19698762 PRJNA599208_P_NODE_3696_length_441_cov_4.279703_g3502_i0 PRJNA599208 3696 441 4.279703 18.87349023 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 492 2.1199999999999998e-134   NTclustered gi|31323484|gb|AF386635.1| 56452 g3502 i0 88.067 51.8367346938776 419 44 95 6 3 420 1219 806 Petalomonas cantuscygni CCAP 1259/1 small subunit ribosomal RNA gene, partial sequence blastn 22860 492 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
20267873 20267873 PRJNA599208_P_NODE_10456_length_209_cov_1.575581_g10260_i0 PRJNA599208 10456 209 1.575581 3.29296429 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 276 9.99e-70   NTclustered gi|440222388|gb|JX030056.1| 5659 g10260 i0 95.882 98.8564593301435 170 7 81 0 40 209 182 13 Leishmania amazonensis isolate LaPH8.rRNA.32 28S ribosomal RNA (LSU-delta M2), partial sequence blastn 20661 276 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
20974449 20974449 PRJNA599208_P_NODE_11037_length_201_cov_1.439024_g10841_i0 PRJNA599208 11037 201 1.439024 2.89243824 Bodo saltans 75058 Euglenozoa other_Eukaryota 254 4.46e-63   NTclustered gi|197723519|gb|EF681898.2| 75058 g10841 i0 95.062 87.5671641791045 162 6 80 2 1 161 759 919 Bodo saltans strain HFCC13 28S ribosomal RNA gene, partial sequence blastn 17601 254 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
20974462 20974462 PRJNA599208_P_NODE_11917_length_189_cov_3.552632_g11721_i0 PRJNA599208 11917 189 3.552632 6.71447448 Trachelomonas sp. Jakeun081409A 1685811 Euglenozoa other_Eukaryota 331 1.86e-86   NTclustered gi|944273534|gb|KT304869.1| 1685811 g11721 i0 98.919 73.3227513227513 185 2 98 0 5 189 941 1125 Trachelomonas sp. Jakeun081409A small subunit ribosomal RNA gene, partial sequence blastn 13858 331 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas sp. Jakeun081409A
22249408 22249408 PRJNA599208_P_NODE_6198_length_307_cov_2.188889_g6002_i0 PRJNA599208 6198 307 2.188889 6.71988923 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 200 9.669999999999999e-47   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g6002 i0 78.997 1.03908794788274 319 48 100 17 1 307 459 148 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 319 200 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
24093386 24093386 PRJNA599208_P_NODE_12999_length_178_cov_2.170213_g12803_i0 PRJNA599208 12999 178 2.170213 3.86297914 Trypanosoma 5690 Euglenozoa other_Eukaryota 237 3.87e-58   NTclustered gi|162233|gb|M63699.1|TRBRGS1 5693 g12803 i0 90.909 116.685393258427 176 16 99 0 3 178 260 85 T.cruzi S3 ribosomal RNA gene blastn 20770 237 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;