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contig_metadata

20 rows where bioproject = "PRJNA599026" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA599026 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15169325 15169325 PRJNA599026_S_NODE_16072_length_253_cov_1.730392_g15616_i0 PRJNA599026 16072 253 1.730392 4.37789176 Pseudomonadati 3379134 Bacteria Bacteria 62.1 3.81e-5   NTclustered gi|2874254020|emb|OY970345.1| 412056 g15616 i0 97.222 1.12252964426877 36 1 14 0 3 38 1738871 1738906 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 blastn 284 62.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
17149591 17149591 PRJNA599026_S_NODE_60694_length_164_cov_0.886957_g60238_i0 PRJNA599026 60694 164 0.886957 1.45460948 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 102 7.29e-25   NR MBM3879532.1 2026799 g60238 i0 92.5 4.88414634146341 53 4 97 0 3 161 159 211 MBM3879532.1 macrocin O-methyltransferase [Verrucomicrobiota bacterium] diamond 801 102 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
24093104 24093104 PRJNA599026_S_NODE_20699_length_230_cov_1.375691_g20243_i0 PRJNA599026 20699 230 1.375691 3.1640893 Prosthecobacter debontii 48467 Bacteria Bacteria 80.9 7.66e-17   NR SKB05870.1 48467 g20243 i0 64.6 3.1304347826087 65 23 84.8 0 10 204 124 188 SKB05870.1 putative colanic acid biosynthesis acetyltransferase WcaF [Prosthecobacter debontii] diamond 720 80.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter debontii
26984872 26984872 PRJNA599026_S_NODE_59962_length_164_cov_0.886957_g59506_i0 PRJNA599026 59962 164 0.886957 1.45460948 Verrucomicrobium spinosum 2736 Bacteria Bacteria 75.1 4.93e-14   NR WP_009962562.1 2736 g59506 i0 74 1.82926829268293 50 13 91.5 0 163 14 235 284 WP_009962562.1 alginate O-acetyltransferase AlgX-related protein [Verrucomicrobium spinosum] diamond 300 75.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Verrucomicrobium Verrucomicrobium spinosum
27712111 27712111 PRJNA599026_S_NODE_33964_length_193_cov_1.062500_g33508_i0 PRJNA599026 33964 193 1.0625 2.050625 Opitutaceae bacterium TAV5 794903 Bacteria Bacteria 73.6 2.69e-13   NR AHF92541.1 794903 g33508 i0 54 0.979274611398964 63 29 97.9 0 5 193 1060 1122 AHF92541.1 hemagglutinin [Opitutaceae bacterium TAV5] diamond 189 73.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium TAV5
28248255 28248255 PRJNA599026_S_NODE_50806_length_167_cov_0.864407_g50350_i0 PRJNA599026 50806 167 0.864407 1.44355969 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 55.1 5.95e-7   NR MCB1207669.1 2026801 g50350 i0 53.4 2.02994011976048 58 24 98.8 1 166 2 1009 1066 MCB1207669.1 autotransporter-associated beta strand repeat-containing protein [Verrucomicrobiales bacterium] diamond 339 55.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28672359 28672359 PRJNA599026_S_NODE_31867_length_197_cov_1.722973_g31411_i0 PRJNA599026 31867 197 1.722973 3.39425681 Pseudomonadati 3379134 Bacteria Bacteria 44.7 0.00417   NR MBS0648952.1 2026799 g31411 i0 48.4 1.69035532994924 31 16 47.2 0 16 108 272 302 MBS0648952.1 FAD-dependent oxidoreductase [Verrucomicrobiota bacterium] diamond 333 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28753612 28753612 PRJNA599026_S_NODE_64727_length_163_cov_0.894737_g64271_i0 PRJNA599026 64727 163 0.894737 1.45842131 Akkermansia sp. 1872421 Bacteria Bacteria 43.1 0.00947   NR MBR2125603.1 1872421 g64271 i0 60 1.38036809815951 25 10 46 0 79 5 188 212 MBR2125603.1 protein kinase [Akkermansia sp.] diamond 225 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
28785026 28785026 PRJNA599026_S_NODE_46727_length_172_cov_1.056911_g46271_i0 PRJNA599026 46727 172 1.056911 1.81788692 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 53.5 2.24e-6   NR MBN8456733.1 2026799 g46271 i0 42 0.872093023255814 50 29 87.2 0 17 166 416 465 MBN8456733.1 alpha-L-fucosidase [Verrucomicrobiota bacterium] diamond 150 53.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29132672 29132672 PRJNA599026_S_NODE_54749_length_166_cov_0.871795_g54293_i0 PRJNA599026 54749 166 0.871795 1.4471797 Luteolibacter sp. SL25 1962973 Bacteria Bacteria 39.7 0.0224   NR WP_267674657.1 2995170 g54293 i0 76.2 0.379518072289157 21 5 38 0 104 166 2 22 WP_267674657.1 hypothetical protein [Luteolibacter sp. SL250] diamond 63 39.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
29290341 29290341 PRJNA599026_S_NODE_52709_length_167_cov_0.864407_g52253_i0 PRJNA599026 52709 167 0.864407 1.44355969 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 70.9 5.73e-13   NR MBI1840806.1 2026799 g52253 i0 59.2 0.880239520958084 49 20 88 0 5 151 99 147 MBI1840806.1 type II secretion system protein [Verrucomicrobiota bacterium] diamond 147 70.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30206010 30206010 PRJNA599026_S_NODE_64092_length_163_cov_0.894737_g63636_i0 PRJNA599026 64092 163 0.894737 1.45842131 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 72 5.75e-13   NR MDX1951515.1 2026799 g63636 i0 69.2 0.957055214723926 52 16 95.7 0 158 3 120 171 MDX1951515.1 tape measure protein [Verrucomicrobiota bacterium] diamond 156 72 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30756729 30756729 PRJNA599026_S_NODE_55274_length_166_cov_0.871795_g54818_i0 PRJNA599026 55274 166 0.871795 1.4471797 Bacteria 2 Bacteria Bacteria 75.9 2.7e-14   NR HUI07131.1 2499141 g54818 i0 66.7 8.80120481927711 54 18 97.6 0 166 5 261 314 HUI07131.1 DUF4041 domain-containing protein [Verrucomicrobiia bacterium] diamond 1461 76.3 0.99475753604194 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31216909 31216909 PRJNA599026_S_NODE_32275_length_196_cov_2.081633_g31819_i0 PRJNA599026 32275 196 2.081633 4.08000068 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 71.2 1.71e-12   NR MBS0621877.1 2026799 g31819 i0 50 0.948979591836735 62 31 94.9 0 191 6 225 286 MBS0621877.1 pyruvate kinase [Verrucomicrobiota bacterium] diamond 186 71.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31280530 31280530 PRJNA599026_S_NODE_61875_length_164_cov_0.886957_g61419_i0 PRJNA599026 61875 164 0.886957 1.45460948 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 70.1 2.86e-12   NR MBI3415380.1 2026799 g61419 i0 66.1 1.02439024390244 56 16 97 1 160 2 1016 1071 MBI3415380.1 PSD1 domain-containing protein [Verrucomicrobiota bacterium] diamond 168 70.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31659950 31659950 PRJNA599026_S_NODE_60717_length_164_cov_0.886957_g60261_i0 PRJNA599026 60717 164 0.886957 1.45460948 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 62 2.01e-9   NR HEX5222173.1 2499141 g60261 i0 53.7 0.98780487804878 54 25 98.8 0 2 163 383 436 HEX5222173.1 Calx-beta domain-containing protein [Verrucomicrobiia bacterium] diamond 162 62 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31863055 31863055 PRJNA599026_S_NODE_51617_length_167_cov_0.864407_g51161_i0 PRJNA599026 51617 167 0.864407 1.44355969 Pseudomonadati 3379134 Bacteria Bacteria 50.8 1.84e-5   NR MBS0604105.1 2026799 g51161 i0 88.5 4.20359281437126 26 3 46.7 0 3 80 248 273 MBS0604105.1 diphosphate--fructose-6-phosphate 1-phosphotransferase [Verrucomicrobiota bacterium] diamond 702 51.2 0.9921875 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32432992 32432992 PRJNA599026_S_NODE_68119_length_162_cov_0.902655_g67663_i0 PRJNA599026 68119 162 0.902655 1.4623011 Pseudomonadati 3379134 Bacteria Bacteria 62.4 1.41e-9   NR MCA1659486.1 2026800 g67663 i0 56 3.87037037037037 50 22 92.6 0 152 3 364 413 MCA1659486.1 efflux RND transporter permease subunit [Verrucomicrobiaceae bacterium] diamond 627 62.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
32451366 32451366 PRJNA599026_S_NODE_8079_length_340_cov_1.591065_g7623_i0 PRJNA599026 8079 340 1.591065 5.409621 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 44.7 0.0217   NR HZE56464.1 2201154 g7623 i0 30.3 4.69411764705882 66 41 58.2 1 203 6 353 413 HZE56464.1 N-acetylmuramoyl-L-alanine amidase [Chthoniobacterales bacterium] diamond 1596 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32797756 32797756 PRJNA599026_S_NODE_6860_length_366_cov_2.662461_g6404_i0 PRJNA599026 6860 366 2.662461 9.74460726 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 56.2 2.73e-6   NR MBN8456733.1 2026799 g6404 i0 41.4 0.918032786885246 58 34 47.5 0 191 364 416 473 MBN8456733.1 alpha-L-fucosidase [Verrucomicrobiota bacterium] diamond 336 56.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;