RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA599026", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA599026 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3122570 3122570 PRJNA599026_S_NODE_30383_length_200_cov_3.357616_g29927_i0 PRJNA599026 30383 200 3.357616 6.715232 Crocidura lasiura hepevirus 3139466 Viruses Viruses 60.2 1.04e-4   NTclustered gi|2717469693|gb|PP272501.1| 3139466 g29927 i0 100 13.275 32 0 16 0 2 33 22 53 MAG: Crocidura lasiura hepevirus isolate hepe_1 helicase gene, complete cds blastn 2655 60.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Hepeviridae   Crocidura lasiura hepevirus
17149018 17149018 PRJNA599026_S_NODE_11934_length_286_cov_1.451477_g11478_i0 PRJNA599026 11934 286 1.451477 4.15122422 Crocidura lasiura hepevirus 3139466 Viruses Viruses 71.3 7.3e-8   NTclustered gi|2717469693|gb|PP272501.1| 3139466 g11478 i0 100 10.9825174825175 38 0 13 0 1 38 17 54 MAG: Crocidura lasiura hepevirus isolate hepe_1 helicase gene, complete cds blastn 3141 71.3 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Hepeviridae   Crocidura lasiura hepevirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;