RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA599026" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA599026 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28672360 28672360 PRJNA599026_S_NODE_60707_length_164_cov_0.886957_g60251_i0 PRJNA599026 60707 164 0.886957 1.45460948 Fodinibius 1397106 Bacteria Bacteria 74.7 7.28e-15   NR NIT61948.1 1872440 g60251 i0 92.3 2.14024390243902 39 3 71.3 0 162 46 151 189 NIT61948.1 hypothetical protein [Fodinibius sp.] diamond 351 75.1 0.994673768308922 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius sp.
30585233 30585233 PRJNA599026_S_NODE_15713_length_255_cov_2.611650_g15257_i0 PRJNA599026 15713 255 2.61165 6.6597075 Balneolaceae bacterium 2053516 Bacteria Bacteria 55.1 1.86e-6   NR MBN2732127.1 2053516 g15257 i0 36.6 5.35294117647059 93 50 98.8 1 253 2 49 141 MBN2732127.1 fumarylacetoacetase [Balneolaceae bacterium] diamond 1365 55.1 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;