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contig_metadata

33 rows where bioproject = "PRJNA599026", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 33 ✖

tax_kingdom 1

  • Metazoa · 33 ✖

tax_clade 1

bioproject 1

  • PRJNA599026 · 33 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1847869 1847869 PRJNA599026_S_NODE_8782_length_327_cov_2.025180_g8326_i0 PRJNA599026 8782 327 2.02518 6.6223386 Caenorhabditis elegans 6239 Nematoda Nematoda 52.8 0.031   NTclustered gi|1845970304|ref|NM_001380347.2| 6239 g8326 i0 100 0.342507645259939 28 0 9 0 54 81 397 370 Caenorhabditis elegans Zinc transporter ZIP3 (zipt-2.4), mRNA blastn 112 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
19697922 19697922 PRJNA599026_S_NODE_17236_length_246_cov_4.715736_g16780_i0 PRJNA599026 17236 246 4.715736 11.60071056 Strongyloides ratti 34506 Nematoda Nematoda 243 1.23e-59   NTclustered gi|1376144465|ref|XM_024652690.1| 34506 g16780 i0 86.283 91.4593495934959 226 27 91 4 1 224 255 32 Strongyloides ratti Actin, alpha cardiac muscle 1 (SRAE_2000170700), partial mRNA blastn 22499 243 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
23524052 23524052 PRJNA599026_S_NODE_37459_length_186_cov_1.452555_g37003_i0 PRJNA599026 37459 186 1.452555 2.7017523 Rhabditida 6236 Nematoda Nematoda 93.2 3.05e-20   NR XP_024503558.1 34506 g37003 i0 71 5.98387096774194 62 18 100 0 1 186 464 525 XP_024503558.1 Clathrin heavy chain [Strongyloides ratti] diamond 1113 93.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
26604798 26604798 PRJNA599026_S_NODE_23581_length_219_cov_2.070588_g23125_i0 PRJNA599026 23581 219 2.070588 4.53458772 Caenorhabditis briggsae 6238 Nematoda Nematoda 50.1 8.11e-6   NR XP_002648286.1 6238 g23125 i0 60 1.84931506849315 45 18 61.6 0 8 142 49 93 XP_002648286.1 Protein CBG24443 [Caenorhabditis briggsae] diamond 405 50.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
26921677 26921677 PRJNA599026_S_NODE_22262_length_224_cov_1.028571_g21806_i0 PRJNA599026 22262 224 1.028571 2.30399904 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 94.4 1.17e-20   NR CAD5208512.1 6326 g21806 i0 81.3 1.41964285714286 48 9 64.3 0 2 145 196 243 CAD5208512.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 318 94.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
26998127 26998127 PRJNA599026_S_NODE_842_length_983_cov_3.078158_g612_i0 PRJNA599026 842 983 3.078158 30.25829314 Rhabditida 6236 Nematoda Nematoda 59.7 4.31e-6   NR KAK6021773.1 6317 g612 i0 61.5 0.982706002034588 39 15 11.9 0 139 23 63 101 KAK6021773.1 serine carboxypeptidase [Ostertagia ostertagi] diamond 966 60.1 0.993344425956739 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Ostertagia Ostertagia ostertagi
27851172 27851172 PRJNA599026_S_NODE_28164_length_206_cov_1.299363_g27708_i0 PRJNA599026 28164 206 1.299363 2.67668778 Strongylidae 27830 Nematoda Nematoda 45.4 0.00257   NR CAJ0590608.1 53992 g27708 i0 95.8 2.09708737864078 24 1 35 0 127 56 449 472 CAJ0590608.1 unnamed protein product [Cylicocyclus nassatus] diamond 432 45.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Cylicocyclus Cylicocyclus nassatus
27869387 27869387 PRJNA599026_S_NODE_19665_length_234_cov_1.832432_g19209_i0 PRJNA599026 19665 234 1.832432 4.28789088 Mesorhabditis belari 2138241 Nematoda Nematoda 57 3.18e-7   NR CAJ0931044.1 2138241 g19209 i0 45.5 12.8333333333333 77 42 98.7 0 234 4 176 252 CAJ0931044.1 unnamed protein product, partial [Mesorhabditis belari] diamond 3003 57 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
27869390 27869390 PRJNA599026_S_NODE_2325_length_626_cov_2.720971_g1924_i0 PRJNA599026 2325 626 2.720971 17.03327846 Diploscapter pachys 2018661 Nematoda Nematoda 136 1.5e-34   NR PAV75968.1 2018661 g1924 i0 45 4.60543130990415 160 86 75.7 1 103 576 42 201 PAV75968.1 hypothetical protein WR25_01581 isoform B [Diploscapter pachys] diamond 2883 136 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
28072257 28072257 PRJNA599026_S_NODE_2165_length_646_cov_4.566164_g1774_i0 PRJNA599026 2165 646 4.566164 29.49741944 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.9 0.00819   NR KAF8381004.1 54126 g1774 i0 57.9 0.835913312693498 38 15 17.2 1 362 252 393 430 KAF8381004.1 hypothetical protein PRIPAC_70146, partial [Pristionchus pacificus] diamond 540 48.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
28216607 28216607 PRJNA599026_S_NODE_41426_length_179_cov_2.700000_g40970_i0 PRJNA599026 41426 179 2.7 4.833 Brugia timori 42155 Nematoda Nematoda 41.6 0.0401   NR VDO43939.1 42155 g40970 i0 53.1 0.972067039106145 32 15 53.6 0 116 21 140 171 VDO43939.1 unnamed protein product [Brugia timori] diamond 174 41.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia timori
28627556 28627556 PRJNA599026_S_NODE_18587_length_239_cov_1.610526_g18131_i0 PRJNA599026 18587 239 1.610526 3.84915714 Steinernema hermaphroditum 289476 Nematoda Nematoda 43.9 0.0137   NR KAK0425456.1 289476 g18131 i0 54.8 1.05439330543933 42 19 52.7 0 108 233 43 84 KAK0425456.1 hypothetical protein QR680_009211 [Steinernema hermaphroditum] diamond 252 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema hermaphroditum
28861574 28861574 PRJNA599026_S_NODE_6728_length_369_cov_8.525000_g6272_i0 PRJNA599026 6728 369 8.525 31.45725 Rhabditida 6236 Nematoda Nematoda 77.4 1.83e-15   NR KAH7694727.1 70226 g6272 i0 51.6 2.04065040650406 62 30 50.4 0 319 134 20 81 KAH7694727.1 40S ribosomal protein S20 [Aphelenchoides avenae] diamond 753 77.8 0.994858611825193 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
29164297 29164297 PRJNA599026_S_NODE_10169_length_307_cov_1.383721_g9713_i0 PRJNA599026 10169 307 1.383721 4.24802347 Oesophagostomum dentatum 61180 Nematoda Nematoda 74.7 4.52e-13   NR KHJ88529.1 61180 g9713 i0 70.8 0.938110749185668 48 14 46.9 0 144 1 324 371 KHJ88529.1 aminopeptidase P domain protein [Oesophagostomum dentatum] diamond 288 74.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Oesophagostomum Oesophagostomum dentatum
29290351 29290351 PRJNA599026_S_NODE_8709_length_328_cov_4.709677_g8253_i0 PRJNA599026 8709 328 4.709677 15.44774056 Trichinella pseudospiralis 6337 Nematoda Nematoda 95.5 5.59e-22   NR KRY01286.1 6337 g8253 i0 60.6 1.71951219512195 94 37 86 0 327 46 90 183 KRY01286.1 hypothetical protein T4E_7203 [Trichinella pseudospiralis] diamond 564 95.5 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
29353671 29353671 PRJNA599026_S_NODE_35489_length_190_cov_1.070922_g35033_i0 PRJNA599026 35489 190 1.070922 2.0347518 Strongyloides ratti 34506 Nematoda Nematoda 49.7 6.72e-5   NR XP_024505678.1 34506 g35033 i0 50 0.789473684210526 50 25 78.9 0 2 151 411 460 XP_024505678.1 BcDNA.GH04637 [Strongyloides ratti] diamond 150 49.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
29524826 29524826 PRJNA599026_S_NODE_8190_length_338_cov_1.795848_g7734_i0 PRJNA599026 8190 338 1.7958480000000001 6.06996624 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47.4 0.0026   NR KAL3081711.1 157864 g7734 i0 45.1 1.85502958579882 51 28 45.3 0 334 182 282 332 KAL3081711.1 hypothetical protein niasHT_035051 [Heterodera trifolii] diamond 627 47.8 0.99163179916318 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
29605774 29605774 PRJNA599026_S_NODE_48450_length_169_cov_4.250000_g47994_i0 PRJNA599026 48450 169 4.25 7.1825 Steinernema carpocapsae 34508 Nematoda Nematoda 59.3 1.26e-8   NR TKR87397.1 34508 g47994 i0 71.1 0.674556213017751 38 10 65.7 1 112 2 49 86 TKR87397.1 hypothetical protein L596_011799 [Steinernema carpocapsae] diamond 114 59.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
29745503 29745503 PRJNA599026_S_NODE_65830_length_162_cov_1.716814_g65374_i0 PRJNA599026 65830 162 1.716814 2.78123868 Caenorhabditis 6237 Nematoda Nematoda 60.5 6.79e-9   NR XP_002638618.1 6238 g65374 i0 46.8 5.16666666666667 47 25 87 0 160 20 586 632 XP_002638618.1 Protein CBG05670 [Caenorhabditis briggsae] diamond 837 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
30061427 30061427 PRJNA599026_S_NODE_33411_length_194_cov_1.213793_g32955_i0 PRJNA599026 33411 194 1.213793 2.35475842 Metazoa 33208 Nematoda Nematoda 45.1 0.00302   NR CDW55413.1 36087 g32955 i0 53.3 3.75773195876289 60 28 92.8 0 5 184 792 851 CDW55413.1 Na+,K+ ATPase alpha subunit 1 [Trichuris trichiura] diamond 729 45.4 0.993392070484582 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
30440873 30440873 PRJNA599026_S_NODE_44453_length_175_cov_1.214286_g43997_i0 PRJNA599026 44453 175 1.214286 2.1250005 Trichostrongylidae 6315 Nematoda Nematoda 65.9 1.03e-10   NR CDJ95948.1 6289 g43997 i0 50 10.92 58 29 99.4 0 2 175 244 301 CDJ95948.1 Glycosyl transferase domain containing protein [Haemonchus contortus] diamond 1911 66.2 0.995468277945619 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
31090921 31090921 PRJNA599026_S_NODE_36675_length_187_cov_3.108696_g36219_i0 PRJNA599026 36675 187 3.108696 5.81326152 Diploscapter pachys 2018661 Nematoda Nematoda 53.9 2.06e-6   NR PAV71979.1 2018661 g36219 i0 52.3 17.6470588235294 44 21 70.6 0 186 55 462 505 PAV71979.1 hypothetical protein WR25_16666 isoform A [Diploscapter pachys] diamond 3300 53.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
31135514 31135514 PRJNA599026_S_NODE_35675_length_189_cov_2.392857_g35219_i0 PRJNA599026 35675 189 2.392857 4.52249973 Rhabditida 6236 Nematoda Nematoda 69.7 4.01e-12   NR NP_501859.1 6239 g35219 i0 51.6 36.4444444444444 62 30 98.4 0 187 2 167 228 NP_501859.1 Small ribosomal subunit protein RACK1 [Caenorhabditis elegans] diamond 6888 70.1 0.994293865905849 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
31280498 31280498 PRJNA599026_S_NODE_15715_length_255_cov_2.553398_g15259_i0 PRJNA599026 15715 255 2.553398 6.5111649 Meloidogyne enterolobii 390850 Nematoda Nematoda 78.2 1.25e-14   NR CAD2166141.1 390850 g15259 i0 47.1 5.09411764705882 85 43 98.8 2 2 253 215 298 CAD2166141.1 unnamed protein product [Meloidogyne enterolobii] diamond 1299 78.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
31312135 31312135 PRJNA599026_S_NODE_19935_length_233_cov_1.385870_g19479_i0 PRJNA599026 19935 233 1.38587 3.2290771 Ditylenchus destructor 166010 Nematoda Nematoda 47.8 5.6e-4   NR KAI1712018.1 166010 g19479 i0 33.3 7.69957081545064 69 40 81.1 2 215 27 385 453 KAI1712018.1 plasma-membrane choline transporter domain-containing protein [Ditylenchus destructor] diamond 1794 47.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
31375581 31375581 PRJNA599026_S_NODE_38596_length_184_cov_1.488889_g38140_i0 PRJNA599026 38596 184 1.488889 2.73955576 Aphelenchoides avenae 70226 Nematoda Nematoda 46.2 0.00103   NR KAH7727569.1 70226 g38140 i0 45 0.652173913043478 40 22 65.2 0 183 64 191 230 KAH7727569.1 PAP/25A associated domain containing protein [Aphelenchoides avenae] diamond 120 46.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
31407230 31407230 PRJNA599026_S_NODE_54956_length_166_cov_0.871795_g54500_i0 PRJNA599026 54956 166 0.871795 1.4471797 Diploscapter pachys 2018661 Nematoda Nematoda 52.4 5.06e-6   NR PAV59540.1 2018661 g54500 i0 51.9 0.975903614457831 54 11 97.6 1 164 3 625 663 PAV59540.1 hypothetical protein WR25_23048 [Diploscapter pachys] diamond 162 52.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
31565460 31565460 PRJNA599026_S_NODE_29636_length_202_cov_2.098039_g29180_i0 PRJNA599026 29636 202 2.098039 4.23803878 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 49.7 2.23e-5   NR CAD6197432.1 2777116 g29180 i0 52.9 1.55940594059406 51 23 74.3 1 201 52 21 71 CAD6197432.1 unnamed protein product [Caenorhabditis auriculariae] diamond 315 49.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
32008163 32008163 PRJNA599026_S_NODE_3758_length_491_cov_4.993213_g3305_i0 PRJNA599026 3758 491 4.993213 24.51667583 Caenorhabditis briggsae 6238 Nematoda Nematoda 90.1 6.04e-18   NR XP_045092044.1 6238 g3305 i0 45.8 38.0835030549898 131 71 80 0 5 397 223 353 XP_045092044.1 Protein CBG02169 [Caenorhabditis briggsae] diamond 18699 90.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
32071389 32071389 PRJNA599026_S_NODE_7538_length_351_cov_1.350993_g7082_i0 PRJNA599026 7538 351 1.350993 4.74198543 Steinernema hermaphroditum 289476 Nematoda Nematoda 58.9 2.79e-7   NR KAK0420690.1 289476 g7082 i0 43.1 1.00854700854701 58 33 49.6 0 93 266 258 315 KAK0420690.1 hypothetical protein QR680_014829 [Steinernema hermaphroditum] diamond 354 58.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema hermaphroditum
32514657 32514657 PRJNA599026_S_NODE_13219_length_274_cov_2.951111_g12763_i0 PRJNA599026 13219 274 2.951111 8.08604414 Pristionchus mayeri 1317129 Nematoda Nematoda 63.5 2.33e-9   NR GMR59452.1 1317129 g12763 i0 39.5 0.941605839416058 86 52 94.2 0 9 266 15 100 GMR59452.1 hypothetical protein PMAYCL1PPCAC_29647, partial [Pristionchus mayeri] diamond 258 63.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus mayeri
32748328 32748328 PRJNA599026_S_NODE_7740_length_347_cov_1.318792_g7284_i0 PRJNA599026 7740 347 1.318792 4.57620824 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 91.7 8.5e-19   NR TKR61278.1 34508 g7284 i0 44.2 45.985590778098 113 63 97.7 0 339 1 292 404 TKR61278.1 hypothetical protein L596_028406 [Steinernema carpocapsae] diamond 15957 92.4 0.992424242424242 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
32779666 32779666 PRJNA599026_S_NODE_21080_length_228_cov_2.363128_g20624_i0 PRJNA599026 21080 228 2.363128 5.38793184 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.3 0.00932   NR UMM22814.1 6238 g20624 i0 57.8 9.26315789473684 64 27 84.2 0 213 22 144 207 UMM22814.1 hypothetical protein L5515_003832 [Caenorhabditis briggsae] diamond 2112 44.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;