RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA599026", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA599026 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28279811 28279811 PRJNA599026_S_NODE_53026_length_166_cov_1.743590_g52570_i0 PRJNA599026 53026 166 1.74359 2.8943594 Rozella allomycis CSF55 988480 Fungi Fungi 64.7 1.83e-10   NR RKP19892.1 988480 g52570 i0 57.8 0.813253012048193 45 19 81.3 0 31 165 130 174 RKP19892.1 protein geranylgeranyltransferase type II [Rozella allomycis CSF55] diamond 135 64.7 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29763788 29763788 PRJNA599026_S_NODE_10071_length_308_cov_2.154440_g9615_i0 PRJNA599026 10071 308 2.15444 6.6356752 Rozella allomycis CSF55 988480 Fungi Fungi 45.4 0.00223   NR EPZ32675.1 988480 g9615 i0 34.8 0.672077922077922 69 39 61.4 2 194 6 31 99 EPZ32675.1 LPS-induced tumor necrosis factor alpha factor domain-containing protein [Rozella allomycis CSF55] diamond 207 45.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32293245 32293245 PRJNA599026_S_NODE_18199_length_241_cov_1.593750_g17743_i0 PRJNA599026 18199 241 1.59375 3.8409375 Rozella allomycis CSF55 988480 Fungi Fungi 56.2 1.16e-7   NR EPZ30796.1 988480 g17743 i0 37.8 2.04149377593361 82 46 95.9 1 239 9 4 85 EPZ30796.1 U box domain-containing protein, partial [Rozella allomycis CSF55] diamond 492 56.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;