RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA599026", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJNA599026 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29858662 29858662 PRJNA599026_S_NODE_43651_length_176_cov_1.606299_g43195_i0 PRJNA599026 43651 176 1.606299 2.82708624 Nitrospinota bacterium 2026769 Bacteria Bacteria 39.3 0.0323   NR MCH8157258.1 2026769 g43195 i0 47.1 0.579545454545455 34 18 58 0 105 4 1 34 MCH8157258.1 bifunctional nuclease family protein [Nitrospinota bacterium] diamond 102 39.3 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
32546201 32546201 PRJNA599026_S_NODE_39019_length_183_cov_2.283582_g38563_i0 PRJNA599026 39019 183 2.283582 4.17895506 Nitrospinota bacterium 2026769 Bacteria Bacteria 61.2 5.01e-9   NR MBI5183309.1 2026769 g38563 i0 50 1.70491803278689 52 26 85.2 0 1 156 81 132 MBI5183309.1 insulinase family protein [Nitrospinota bacterium] diamond 312 61.2 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
32640323 32640323 PRJNA599026_S_NODE_56780_length_165_cov_0.879310_g56324_i0 PRJNA599026 56780 165 0.87931 1.4508615 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 55.5 3.28e-7   NR MEE8303141.1 2528274 g56324 i0 49.1 0.963636363636364 53 22 87.3 1 21 164 149 201 MEE8303141.1 response regulator transcription factor [Candidatus Tectimicrobiota bacterium] diamond 159 55.5 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;