RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA599026", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 6 ✖

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJNA599026 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17149267 17149267 PRJNA599026_S_NODE_35034_length_191_cov_0.795775_g34578_i0 PRJNA599026 35034 191 0.795775 1.51993025 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 54.7 0.005   NTclustered gi|2319593202|ref|XM_001583948.2| 412133 g34578 i0 96.875 0.167539267015707 32 1 17 0 145 176 5250 5219 Trichomonas vaginalis G3 protein serine/threonine kinase protein (TVAGG3_0528790), partial mRNA blastn 32 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
23524394 23524394 PRJNA599026_S_NODE_64219_length_163_cov_0.894737_g63763_i0 PRJNA599026 64219 163 0.894737 1.45842131 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 302 1.22e-77   NTclustered gi|2319624471|ref|XM_051224421.1| 412133 g63763 i0 100 100 163 0 100 0 1 163 591 429 Trichomonas vaginalis G3 protein of unknown function, DUF4106 family (TVAGG3_0144350), partial mRNA blastn 16300 302 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27346257 27346257 PRJNA599026_S_NODE_31403_length_198_cov_1.711409_g30947_i0 PRJNA599026 31403 198 1.711409 3.38858982 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.1 0.0118   NR XP_067777651.1 135588 g30947 i0 57.5 1.18181818181818 40 15 60.6 1 170 51 11 48 XP_067777651.1 Ropporin-1-like protein [Histomonas meleagridis] diamond 234 43.5 0.990804597701149 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
28451389 28451389 PRJNA599026_S_NODE_41066_length_180_cov_1.244275_g40610_i0 PRJNA599026 41066 180 1.244275 2.239695 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47.4 3.81e-4   NR XP_067769028.1 135588 g40610 i0 60 4 30 12 50 0 85 174 366 395 XP_067769028.1 AGC family protein kinase [Histomonas meleagridis] diamond 720 47.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29858642 29858642 PRJNA599026_S_NODE_11551_length_290_cov_1.904564_g11095_i0 PRJNA599026 11551 290 1.904564 5.5232356 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 60.5 3.85e-8   NR XP_068361143.1 1144522 g11095 i0 37.2 0.806896551724138 78 49 80.7 0 47 280 418 495 XP_068361143.1 uncharacterized protein TRFO_23625 [Tritrichomonas foetus] diamond 234 60.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31723302 31723302 PRJNA599026_S_NODE_1317_length_812_cov_2.950197_g1005_i0 PRJNA599026 1317 812 2.950197 23.95559964 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 64.3 1.47e-7   NR XP_067770248.1 135588 g1005 i0 66.7 0.746305418719212 48 16 17.7 0 537 394 594 641 XP_067770248.1 DNA replication licensing factor mcm6 [Histomonas meleagridis] diamond 606 64.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;