RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA599026", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA599026 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22249023 22249023 PRJNA599026_S_NODE_57318_length_165_cov_0.879310_g56862_i0 PRJNA599026 57318 165 0.87931 1.4508615 Ignavibacteria bacterium 2053306 Bacteria Bacteria 305 9.59e-79   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g56862 i0 100 121 165 0 100 0 1 165 817715 817879 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 19965 305 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31185423 31185423 PRJNA599026_S_NODE_10015_length_309_cov_1.773077_g9559_i0 PRJNA599026 10015 309 1.773077 5.47880793 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 57.8 1.1e-7   NR MBK7380769.1 2049428 g9559 i0 40.5 0.718446601941748 74 44 71.8 0 227 6 4 77 MBK7380769.1 hypothetical protein [Ignavibacteriales bacterium] diamond 222 57.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
31976391 31976391 PRJNA599026_S_NODE_28018_length_206_cov_2.923567_g27562_i0 PRJNA599026 28018 206 2.923567 6.02254802 Ignavibacterium album 591197 Bacteria Bacteria 47.4 5.25e-4   NR WP_014561437.1 591197 g27562 i0 61.1 1.04854368932039 36 14 52.4 0 99 206 227 262 WP_014561437.1 glycoside hydrolase family 5 protein [Ignavibacterium album] diamond 216 47.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;