RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA599026", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA599026 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28816491 28816491 PRJNA599026_S_NODE_3748_length_492_cov_2.216704_g3295_i0 PRJNA599026 3748 492 2.216704 10.90618368 Fidelibacterota bacterium 2026760 Bacteria Bacteria 45.4 0.049   NR MFL2997862.1 2026760 g3295 i0 28 0.76219512195122 125 72 68.3 4 19 354 471 590 MFL2997862.1 penicillin acylase family protein [Fidelibacterota bacterium] diamond 375 45.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30535520 30535520 PRJNA599026_S_NODE_26933_length_209_cov_2.343750_g26477_i0 PRJNA599026 26933 209 2.34375 4.8984375 Bacteria 2 Bacteria Bacteria 75.1 7.99e-14   NR MEE8478757.1 2026760 g26477 i0 64.7 7.29186602870813 51 18 73.2 0 161 9 177 227 MEE8478757.1 phosphoglycerate kinase [Fidelibacterota bacterium] diamond 1524 75.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;