RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

32 rows where bioproject = "PRJNA599026" and tax_clade = "Amoebozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA599026 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6949729 6949729 PRJNA599026_S_NODE_20726_length_230_cov_1.127072_g20270_i0 PRJNA599026 20726 230 1.127072 2.5922656 Entamoeba dispar 46681 Evosea other_Eukaryota 178 3.25e-40   NTclustered gi|167388768|ref|XM_001738637.1| 370354 g20270 i0 86.503 37.3826086956522 163 20 70 2 2 163 941 780 Entamoeba dispar SAW760 26S protease regulatory subunit 6A, putative (EDI_316920), partial mRNA blastn 8598 178 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
6950026 6950026 PRJNA599026_S_NODE_4806_length_435_cov_2.199482_g4351_i0 PRJNA599026 4806 435 2.199482 9.5677467 Acytostelium subglobosum 361139 Evosea other_Eukaryota 56.5 0.003   NTclustered gi|831758430|ref|XM_012893886.1| 1410327 g4351 i0 92.308 0.0896551724137931 39 3 9 0 25 63 1110 1148 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 39 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
6950379 6950379 PRJNA599026_S_NODE_75346_length_151_cov_2.088235_g74890_i0 PRJNA599026 75346 151 2.088235 3.15323485 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 73.1 9.46e-9   NTclustered gi|2386968834|ref|NC_068853.1| 343530 g74890 i0 82.927 0.927152317880795 82 12 54 2 58 138 48650 48730 Thecamoeba quadrilineata mitochondrion, complete genome blastn 140 73.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
18992709 18992709 PRJNA599026_S_NODE_57275_length_165_cov_0.879310_g56819_i0 PRJNA599026 57275 165 0.87931 1.4508615 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 85.9 3.28e-18   NR PRP89779.1 1890364 g56819 i0 65.5 3 55 19 100 0 165 1 206 260 PRP89779.1 hypothetical protein PROFUN_00121 [Planoprotostelium fungivorum] diamond 495 85.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26872043 26872043 PRJNA599026_S_NODE_6301_length_381_cov_1.885542_g5845_i0 PRJNA599026 6301 381 1.885542 7.18391502 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.1 4.76e-4   NR XP_004259529.1 370355 g5845 i0 33.3 1.18897637795276 87 52 66.1 3 374 123 385 468 XP_004259529.1 serine-threonine protein kinase, putative [Entamoeba invadens IP1] diamond 453 50.4 0.994047619047619 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
27346253 27346253 PRJNA599026_S_NODE_18883_length_238_cov_1.079365_g18427_i0 PRJNA599026 18883 238 1.079365 2.5688887 Entamoeba 5758 Evosea other_Eukaryota 73.2 6.88e-13   NR GAT95768.1 5759 g18427 i0 65.9 2.77310924369748 44 15 55.5 0 139 8 1902 1945 GAT95768.1 hypothetical protein conserved domain containing [Entamoeba histolytica] diamond 660 73.2 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
27743535 27743535 PRJNA599026_S_NODE_10764_length_299_cov_1.928000_g10308_i0 PRJNA599026 10764 299 1.928 5.76472 Entamoeba dispar SAW76 46681 Evosea other_Eukaryota 73.6 1.08e-12   NR XP_001741774.1 370354 g10308 i0 40 4.77591973244147 95 56 95.3 1 9 293 375 468 XP_001741774.1 uncharacterized protein EDI_288520 [Entamoeba dispar SAW760] diamond 1428 73.6 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
27837801 27837801 PRJNA599026_S_NODE_3324_length_521_cov_3.711864_g2877_i0 PRJNA599026 3324 521 3.711864 19.33881144 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 137 2.7799999999999997e-37   NR XP_004333244.1 1257118 g2877 i0 42.7 0.904030710172745 157 86 90.4 1 521 51 16 168 XP_004333244.1 MAPEG family protein [Acanthamoeba castellanii str. Neff] diamond 471 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28058946 28058946 PRJNA599026_S_NODE_6165_length_385_cov_1.877976_g5709_i0 PRJNA599026 6165 385 1.877976 7.2302076 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 94.7 5.04e-20   NR KAH3743721.1 1580589 g5709 i0 42.6 4.03636363636364 129 71 98.2 3 385 8 43 171 KAH3743721.1 alpha/beta hydrolase [Pelomyxa schiedti] diamond 1554 94.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28216605 28216605 PRJNA599026_S_NODE_3746_length_492_cov_2.367946_g3293_i0 PRJNA599026 3746 492 2.367946 11.65029432 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 45.8 0.036   NR KAH3764249.1 1580589 g3293 i0 51.2 0.524390243902439 43 19 25 2 269 147 397 439 KAH3764249.1 epithelial splicing regulatory protein 2 [Pelomyxa schiedti] diamond 258 46.2 0.991341991341991 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28609091 28609091 PRJNA599026_S_NODE_55967_length_165_cov_2.603448_g55511_i0 PRJNA599026 55967 165 2.603448 4.2956892 Eumycetozoa 142796 Evosea other_Eukaryota 64.7 1.8e-10   NR KYQ99901.1 361077 g55511 i0 56 4.58181818181818 50 22 90.9 0 157 8 16 65 KYQ99901.1 hypothetical protein DLAC_03866 [Tieghemostelium lacteum] diamond 756 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28627562 28627562 PRJNA599026_S_NODE_26687_length_210_cov_1.267081_g26231_i0 PRJNA599026 26687 210 1.267081 2.6608701 Cavenderia fasciculata 261658 Evosea other_Eukaryota 52 8.97e-6   NR XP_004362055.1 261658 g26231 i0 60.6 1.84285714285714 33 13 47.1 0 174 76 47 79 XP_004362055.1 uncharacterized protein DFA_06351 [Cavenderia fasciculata] diamond 387 52 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28753589 28753589 PRJNA599026_S_NODE_32727_length_195_cov_2.404110_g32271_i0 PRJNA599026 32727 195 2.40411 4.6880145 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 63.9 6.45e-10   NR KYQ89124.1 361077 g32271 i0 46.4 0.861538461538462 56 29 84.6 1 9 173 320 375 KYQ89124.1 hypothetical protein DLAC_10364 [Tieghemostelium lacteum] diamond 168 63.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28974773 28974773 PRJNA599026_S_NODE_35968_length_189_cov_1.092857_g35512_i0 PRJNA599026 35968 189 1.092857 2.06549973 Heterostelium album PN5 2086695 Evosea other_Eukaryota 49.3 8.92e-5   NR XP_020436542.1 670386 g35512 i0 45.2 1.31746031746032 42 23 66.7 0 7 132 332 373 XP_020436542.1 deoxyribonuclease II [Heterostelium album PN500] diamond 249 49.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
29006629 29006629 PRJNA599026_S_NODE_53468_length_166_cov_1.179487_g53012_i0 PRJNA599026 53468 166 1.179487 1.95794842 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 42.7 0.0132   NR KYR01636.1 361077 g53012 i0 45.7 0.831325301204819 46 24 81.3 1 136 2 255 300 KYR01636.1 tetratricopeptide-like helical domain-containing protein (TPR) [Tieghemostelium lacteum] diamond 138 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29479499 29479499 PRJNA599026_S_NODE_18010_length_242_cov_1.512953_g17554_i0 PRJNA599026 18010 242 1.512953 3.66134626 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 66.2 1.84e-10   NR XP_004339486.1 1257118 g17554 i0 45.6 2.00826446280992 79 42 97.9 1 2 238 73 150 XP_004339486.1 Nacylsphingosine amidohydrolase, putative [Acanthamoeba castellanii str. Neff] diamond 486 66.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29637324 29637324 PRJNA599026_S_NODE_5190_length_418_cov_4.043360_g4735_i0 PRJNA599026 5190 418 4.04336 16.9012448 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 101 3.66e-24   NR KAH3757103.1 1580589 g4735 i0 41.5 0.84688995215311 118 65 82.5 2 4 348 50 166 KAH3757103.1 hypothetical protein Pelo_11131 [Pelomyxa schiedti] diamond 354 101 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29668913 29668913 PRJNA599026_S_NODE_6590_length_373_cov_2.626543_g6134_i0 PRJNA599026 6590 373 2.626543 9.79700539 Dictyostelium purpureum 5786 Evosea other_Eukaryota 145 1.85e-38   NR XP_003283882.1 5786 g6134 i0 55.6 3.94101876675603 124 54 98.9 1 370 2 26 149 XP_003283882.1 uncharacterized protein DICPUDRAFT_96518 [Dictyostelium purpureum] diamond 1470 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30092998 30092998 PRJNA599026_S_NODE_14412_length_264_cov_2.725581_g13956_i0 PRJNA599026 14412 264 2.725581 7.19553384 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.1 1.73e-21   NR XP_004255611.1 370355 g13956 i0 68.9 3.51136363636364 61 19 69.3 0 1 183 269 329 XP_004255611.1 S-adenosylmethionine synthetase, putative [Entamoeba invadens IP1] diamond 927 97.8 0.992842535787321 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
30174598 30174598 PRJNA599026_S_NODE_44132_length_175_cov_3.460317_g43676_i0 PRJNA599026 44132 175 3.460317 6.05555475 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 75.9 3.14e-14   NR KAH3744798.1 1580589 g43676 i0 72.9 5.84571428571429 48 13 82.3 0 145 2 132 179 KAH3744798.1 phenylalanyl-tRNA synthetase [Pelomyxa schiedti] diamond 1023 75.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30661905 30661905 PRJNA599026_S_NODE_37393_length_186_cov_1.489051_g36937_i0 PRJNA599026 37393 186 1.489051 2.76963486 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.5 0.009   NR KAF2075217.1 133409 g36937 i0 43.2 6.95161290322581 44 25 71 0 139 8 124 167 KAF2075217.1 hypothetical protein CYY_003478 [Polysphondylium violaceum] diamond 1293 43.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30679969 30679969 PRJNA599026_S_NODE_36773_length_187_cov_1.847826_g36317_i0 PRJNA599026 36773 187 1.847826 3.45543462 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 42.4 0.0251   NR XP_004254989.1 370355 g36317 i0 53.1 0.513368983957219 32 15 51.3 0 171 76 473 504 XP_004254989.1 protein serine/threonine kinase, putative [Entamoeba invadens IP1] diamond 96 42.4 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
30775120 30775120 PRJNA599026_S_NODE_16294_length_252_cov_1.187192_g15838_i0 PRJNA599026 16294 252 1.187192 2.99172384 Dictyostelium purpureum 5786 Evosea other_Eukaryota 46.6 0.00178   NR XP_003282869.1 5786 g15838 i0 40 0.773809523809524 65 39 77.4 0 2 196 201 265 XP_003282869.1 uncharacterized protein DICPUDRAFT_73870 [Dictyostelium purpureum] diamond 195 46.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30806592 30806592 PRJNA599026_S_NODE_1034_length_909_cov_3.853488_g762_i0 PRJNA599026 1034 909 3.853488 35.02820592 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 168 8.52e-46   NR KAH3760341.1 1580589 g762 i0 37.3 0.884488448844885 268 163 86.8 4 95 883 36 303 KAH3760341.1 glycoside hydrolase [Pelomyxa schiedti] diamond 804 168 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30838172 30838172 PRJNA599026_S_NODE_45674_length_173_cov_1.645161_g45218_i0 PRJNA599026 45674 173 1.645161 2.84612853 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 66.2 7.36e-11   NR XP_012757718.1 1410327 g45218 i0 52.6 1.89017341040462 57 27 98.8 0 172 2 179 235 XP_012757718.1 hypothetical protein SAMD00019534_016730, partial [Acytostelium subglobosum LB1] diamond 327 66.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
30901460 30901460 PRJNA599026_S_NODE_70154_length_161_cov_0.910714_g69698_i0 PRJNA599026 70154 161 0.910714 1.46624954 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 42.7 0.012   NR KYR01942.1 361077 g69698 i0 33.3 0.838509316770186 45 30 83.9 0 5 139 147 191 KYR01942.1 hypothetical protein DLAC_00732 [Tieghemostelium lacteum] diamond 135 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30933047 30933047 PRJNA599026_S_NODE_66094_length_162_cov_1.309735_g65638_i0 PRJNA599026 66094 162 1.309735 2.1217707 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 70.5 3.34e-14   NR PRP89405.1 1890364 g65638 i0 66.7 1.77777777777778 48 16 88.9 0 5 148 44 91 PRP89405.1 40S ribosomal protein S21 [Planoprotostelium fungivorum] diamond 288 70.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31027899 31027899 PRJNA599026_S_NODE_10135_length_307_cov_3.317829_g9679_i0 PRJNA599026 10135 307 3.317829 10.18573503 Cavenderia fasciculata 261658 Evosea other_Eukaryota 80.5 4.4e-15   NR XP_004359557.1 261658 g9679 i0 78.3 0.899022801302932 46 10 45 0 184 47 612 657 XP_004359557.1 succinate dehydrogenase [Cavenderia fasciculata] diamond 276 80.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31547136 31547136 PRJNA599026_S_NODE_45536_length_173_cov_2.395161_g45080_i0 PRJNA599026 45536 173 2.395161 4.14362853 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.6 3.41e-15   NR XP_004362124.1 261658 g45080 i0 68.9 11.757225433526 45 14 78 0 5 139 247 291 XP_004362124.1 P-type ATPase [Cavenderia fasciculata] diamond 2034 79 0.994936708860759 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31673374 31673374 PRJNA599026_S_NODE_8517_length_332_cov_1.081272_g8061_i0 PRJNA599026 8517 332 1.081272 3.58982304 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 138 1.69e-36   NR ABQ41405.1 308476 g8061 i0 63.1 11.3493975903614 103 35 93.1 1 330 22 267 366 ABQ41405.1 elongation factor 1A, partial [Filamoeba sinensis] diamond 3768 139 0.992805755395683 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba sinensis
31958099 31958099 PRJNA599026_S_NODE_73637_length_156_cov_2.383178_g73181_i0 PRJNA599026 73637 156 2.383178 3.71775768 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.6 1.75e-4   NR KAF2075378.1 133409 g73181 i0 47.6 4.32692307692308 42 22 80.8 0 128 3 78 119 KAF2075378.1 hypothetical protein CYY_003302 [Polysphondylium violaceum] diamond 675 46.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32419487 32419487 PRJNA599026_S_NODE_13939_length_268_cov_1.863014_g13483_i0 PRJNA599026 13939 268 1.863014 4.99287752 Heterostelium album PN5 2086695 Evosea other_Eukaryota 82.8 3.88e-16   NR XP_020427315.1 670386 g13483 i0 41.8 1.01865671641791 91 47 98.5 2 2 265 133 220 XP_020427315.1 hypothetical protein PPL_11255 [Heterostelium album PN500] diamond 273 82.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;