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contig_metadata

7 rows where bioproject = "PRJNA597223" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA597223 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5672722 5672722 PRJNA597223_P_NODE_26325_length_301_cov_4.409774_g24480_i0 PRJNA597223 26325 301 4.409774 13.27341974 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 499 8.32e-137   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g24480 i0 96.98 94.8571428571429 298 8 99 1 1 298 3700 3404 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28552 499 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
13323145 13323145 PRJNA597223_P_NODE_51291_length_194_cov_17.811321_g49445_i0 PRJNA597223 51291 194 17.811321 34.55396274 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 322 1.16e-83   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g49445 i0 96.875 38.5618556701031 192 6 99 0 1 192 3260 3069 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7481 322 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
18420706 18420706 PRJNA597223_P_NODE_11015_length_519_cov_21.216942_g9317_i0 PRJNA597223 11015 519 21.216942 110.11592898 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 643 6.599999999999998e-180   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g9317 i0 89.06 29.5838150289017 521 53 99 3 1 518 3036 2517 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15354 643 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
18421190 18421190 PRJNA597223_P_NODE_53315_length_190_cov_56.219355_g51469_i0 PRJNA597223 53315 190 56.219355 106.8167745 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 268 1.49e-67   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g51469 i0 97.452 82.0947368421053 157 4 83 0 10 166 1675 1831 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15598 268 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
19695509 19695509 PRJNA597223_P_NODE_39536_length_228_cov_1.880829_g37690_i0 PRJNA597223 39536 228 1.880829 4.28829012 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 322 1.4e-83   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g37690 i0 92.793 52.2763157894737 222 16 97 0 6 227 2226 2447 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11919 322 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
20971207 20971207 PRJNA597223_P_NODE_27517_length_292_cov_4.898833_g25671_i0 PRJNA597223 27517 292 4.898833 14.30459236 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 207 5.46e-49   NTclustered gi|511487963|gb|JX898537.1| 1260765 g25671 i0 85.507 10.736301369863 207 20 69 9 1 202 202 1 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 3135 207 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
23521422 23521422 PRJNA597223_P_NODE_4099_length_860_cov_6.333333_g3016_i0 PRJNA597223 4099 860 6.333333 54.4666638 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 1144 0   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g3016 i0 91.176 34.4755813953488 850 63 99 11 11 858 4777 3938 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29649 1144 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;