RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA597223" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA597223 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27111287 27111287 PRJNA597223_P_NODE_18842_length_376_cov_2.909091_g17016_i0 PRJNA597223 18842 376 2.909091 10.93818216 Tubulinosema ratisbonensis 291195 Fungi Fungi 167 4.08e-49   NR RVD90613.1 291195 g17016 i0 98.8 0.686170212765957 86 1 68.6 0 119 376 1 86 RVD90613.1 hypothetical protein TUBRATIS_29590 [Tubulinosema ratisbonensis] diamond 258 167 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
27364625 27364625 PRJNA597223_P_NODE_72003_length_168_cov_1.060150_g70157_i0 PRJNA597223 72003 168 1.06015 1.781052 Tubulinosema ratisbonensis 291195 Fungi Fungi 76.3 1.96e-14   NR RVD90615.1 291195 g70157 i0 97.4 0.696428571428571 39 1 69.6 0 50 166 1 39 RVD90615.1 hypothetical protein TUBRATIS_29580, partial [Tubulinosema ratisbonensis] diamond 117 76.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
27680400 27680400 PRJNA597223_P_NODE_20004_length_362_cov_2.119266_g18171_i0 PRJNA597223 20004 362 2.119266 7.67174292 Tubulinosema ratisbonensis 291195 Fungi Fungi 258 4.7000000000000005e-80   NR RVD90501.1 291195 g18171 i0 100 0.994475138121547 120 0 99.4 0 2 361 363 482 RVD90501.1 hypothetical protein TUBRATIS_31610 [Tubulinosema ratisbonensis] diamond 360 258 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
28595898 28595898 PRJNA597223_P_NODE_17987_length_387_cov_3.002841_g16166_i0 PRJNA597223 17987 387 3.002841 11.62099467 Tubulinosema ratisbonensis 291195 Fungi Fungi 117 9.21e-28   NR RVD90501.1 291195 g16166 i0 98.3 0.457364341085271 59 1 45.7 0 206 382 154 212 RVD90501.1 hypothetical protein TUBRATIS_31610 [Tubulinosema ratisbonensis] diamond 177 117 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
30616844 30616844 PRJNA597223_P_NODE_17473_length_394_cov_2.988858_g15656_i0 PRJNA597223 17473 394 2.988858 11.77610052 Tubulinosema ratisbonensis 291195 Fungi Fungi 250 9.2e-77   NR RVD90501.1 291195 g15656 i0 100 0.99746192893401 131 0 99.7 0 1 393 221 351 RVD90501.1 hypothetical protein TUBRATIS_31610 [Tubulinosema ratisbonensis] diamond 393 250 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
31565417 31565417 PRJNA597223_P_NODE_17476_length_394_cov_2.821727_g15659_i0 PRJNA597223 17476 394 2.821727 11.11760438 Nosema granulosis 83296 Fungi Fungi 82.4 2.7e-15   NR KAF9756187.1 83296 g15659 i0 37.8 3.10659898477157 127 71 91.4 2 5 364 366 491 KAF9756187.1 Retrovirus-related Pol polyprotein from transposon, partial [Nosema granulosis] diamond 1224 82.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis
32514637 32514637 PRJNA597223_P_NODE_67919_length_174_cov_1.589928_g66073_i0 PRJNA597223 67919 174 1.589928 2.76647472 Tubulinosema ratisbonensis 291195 Fungi Fungi 127 3.67e-33   NR RVD90615.1 291195 g66073 i0 98.2 0.982758620689655 57 1 98.3 0 173 3 42 98 RVD90615.1 hypothetical protein TUBRATIS_29580, partial [Tubulinosema ratisbonensis] diamond 171 127 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
32546173 32546173 PRJNA597223_P_NODE_61879_length_185_cov_1.253333_g60033_i0 PRJNA597223 61879 185 1.253333 2.31866605 Tubulinosema ratisbonensis 291195 Fungi Fungi 131 7.63e-34   NR RVD90501.1 291195 g60033 i0 100 0.972972972972973 60 0 97.3 0 181 2 566 625 RVD90501.1 hypothetical protein TUBRATIS_31610 [Tubulinosema ratisbonensis] diamond 180 131 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;