contig_metadata
11 rows where bioproject = "PRJNA597223" and tax_phylum = "Chloroflexota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3119945 | 3119945 | PRJNA597223_P_NODE_26883_length_297_cov_3.095420_g25037_i0 | PRJNA597223 | 26883 | 297 | 3.09542 | 9.1933974 | Caldilineaceae bacterium | 2614250 | Bacteria | Bacteria | 134 | 9.58e-27 | NTclustered | gi|2893358382|emb|OZ220676.1| | 2614250 | g25037 | i0 | 91.753 | 20.5454545454545 | 97 | 6 | 32 | 2 | 27 | 122 | 358022 | 357927 | MAG: Caldilineaceae bacterium isolate 6911f4b3-f793-4dac-9473-b80504ec0e1d genome assembly, chromosome: 1 | blastn | 6102 | 134 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilineaceae bacterium | |||
| 5673119 | 5673119 | PRJNA597223_P_NODE_65065_length_179_cov_1.666667_g63219_i0 | PRJNA597223 | 65065 | 179 | 1.666667 | 2.98333393 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 230 | 6.529999999999999e-56 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g63219 | i0 | 91.617 | 16.4134078212291 | 167 | 12 | 93 | 2 | 1 | 166 | 275774 | 275939 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 2938 | 230 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 6947051 | 6947051 | PRJNA597223_P_NODE_14126_length_449_cov_4.120773_g12346_i0 | PRJNA597223 | 14126 | 449 | 4.120773 | 18.50227077 | Candidatus Roseilinea sp. | 2838777 | Bacteria | Bacteria | 355 | 2.96e-93 | NTclustered | gi|2314722916|dbj|AP024676.1| | 2838777 | g12346 | i0 | 81.25 | 76.4432071269488 | 448 | 76 | 99 | 8 | 1 | 443 | 3496109 | 3495665 | MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome | blastn | 34323 | 355 | 1 | Bacteria | Candidatus Thermofonsia Clade 3 | Bacillati | Chloroflexota | Candidatus Thermofontia | Candidatus Roseilinea | Candidatus Roseilinea sp. | |||
| 8222763 | 8222763 | PRJNA597223_P_NODE_80347_length_157_cov_2.172131_g78501_i0 | PRJNA597223 | 80347 | 157 | 2.172131 | 3.41024567 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 148 | 1.61e-31 | NTclustered | gi|2874253704|emb|OY969431.1| | 1672391 | g78501 | i0 | 84.177 | 55.2165605095541 | 158 | 20 | 99 | 3 | 3 | 157 | 64494 | 64649 | MAG: uncultured Chloroflexia bacterium isolate MFD02979.bin.c.2 genome assembly, chromosome: 1 | blastn | 8669 | 148 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 15168965 | 15168965 | PRJNA597223_P_NODE_73932_length_165_cov_1.792308_g72086_i0 | PRJNA597223 | 73932 | 165 | 1.792308 | 2.9573082 | Caldilinea | 233191 | Bacteria | Bacteria | 198 | 1.67e-46 | NTclustered | gi|470476010|ref|NR_076314.1| | 133453 | g72086 | i0 | 89.024 | 131.581818181818 | 164 | 12 | 99 | 3 | 2 | 165 | 539 | 696 | Caldilinea aerophila strain STL-6-O1 23S ribosomal RNA gene, complete sequence | blastn | 21711 | 198 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilinea | Caldilinea aerophila | ||
| 17718564 | 17718564 | PRJNA597223_P_NODE_49654_length_198_cov_2.202454_g47808_i0 | PRJNA597223 | 49654 | 198 | 2.202454 | 4.36085892 | Bacteria | 2 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2320774688|gb|CP075527.1| | 2073117 | g47808 | i0 | 94.286 | 0.353535353535354 | 35 | 2 | 18 | 0 | 28 | 62 | 897913 | 897879 | MAG: Anaerolineales bacterium isolate TGS_CHL4 chromosome | blastn | 70 | 54.7 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineales bacterium | ||||
| 18992028 | 18992028 | PRJNA597223_P_NODE_20355_length_358_cov_2.888545_g18521_i0 | PRJNA597223 | 20355 | 358 | 2.888545 | 10.3409911 | Caldilinea | 233191 | Bacteria | Bacteria | 351 | 2.99e-92 | NTclustered | gi|470476010|ref|NR_076314.1| | 133453 | g18521 | i0 | 85.549 | 176.466480446927 | 346 | 37 | 96 | 4 | 5 | 348 | 1570 | 1236 | Caldilinea aerophila strain STL-6-O1 23S ribosomal RNA gene, complete sequence | blastn | 63175 | 351 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilinea | Caldilinea aerophila | ||
| 21542731 | 21542731 | PRJNA597223_P_NODE_82917_length_154_cov_3.773109_g81071_i0 | PRJNA597223 | 82917 | 154 | 3.773109 | 5.81058786 | Chloroflexus | 1107 | Bacteria | Bacteria | 87.9 | 3.46e-13 | NTclustered | gi|470483916|ref|NR_076619.1| | 152260 | g81071 | i0 | 85.227 | 6.62987012987013 | 88 | 9 | 56 | 4 | 28 | 114 | 1313 | 1229 | Chloroflexus aggregans strain MD-66 23S ribosomal RNA gene, complete sequence | blastn | 1021 | 87.9 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Chloroflexaceae | Chloroflexus | Chloroflexus aggregans | ||
| 24092710 | 24092710 | PRJNA597223_P_NODE_53139_length_191_cov_1.788462_g51293_i0 | PRJNA597223 | 53139 | 191 | 1.788462 | 3.41596242 | Caldilinea | 233191 | Bacteria | Bacteria | 91.6 | 3.48e-14 | NTclustered | gi|470476010|ref|NR_076314.1| | 133453 | g51293 | i0 | 77.143 | 3.18848167539267 | 175 | 29 | 86 | 10 | 3 | 167 | 494 | 321 | Caldilinea aerophila strain STL-6-O1 23S ribosomal RNA gene, complete sequence | blastn | 609 | 91.6 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilinea | Caldilinea aerophila | ||
| 26636596 | 26636596 | PRJNA597223_P_NODE_57421_length_187_cov_1.052632_g55575_i0 | PRJNA597223 | 57421 | 187 | 1.052632 | 1.96842184 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 62.4 | 1.4e-10 | NR | MEX0629275.1 | 2026724 | g55575 | i0 | 55.7 | 1.9572192513369 | 61 | 27 | 97.9 | 0 | 3 | 185 | 19 | 79 | MEX0629275.1 CopG family transcriptional regulator [Chloroflexota bacterium] | diamond | 366 | 62.4 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 27048280 | 27048280 | PRJNA597223_P_NODE_73862_length_165_cov_1.992308_g72016_i0 | PRJNA597223 | 73862 | 165 | 1.992308 | 3.2873082 | Candidatus Ribeiella danica | 3140698 | Bacteria | Bacteria | 85.5 | 1.09e-17 | NR | MBK9714445.1 | 3140698 | g72016 | i0 | 71.7 | 6.74545454545455 | 53 | 15 | 96.4 | 0 | 160 | 2 | 76 | 128 | MBK9714445.1 flotillin family protein [Candidatus Ribeiella danica] | diamond | 1113 | 85.5 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Candidatus Ribeiella | Candidatus Ribeiella danica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;