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contig_metadata

29 rows where bioproject = "PRJNA597223" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA597223 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1844614 1844614 PRJNA597223_P_NODE_30602_length_271_cov_38.512712_g28756_i0 PRJNA597223 30602 271 38.512712 104.36944952 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 496 9.55e-136   NTclustered gi|238617602|gb|FJ973377.1| 188950 g28756 i0 99.631 31.9483394833948 271 1 100 0 1 271 2413 2143 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8658 496 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
1844924 1844924 PRJNA597223_P_NODE_55722_length_188_cov_5.352941_g53876_i0 PRJNA597223 55722 188 5.352941 10.06352908 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 340 3.07e-89   NTclustered gi|238617602|gb|FJ973377.1| 188950 g53876 i0 99.465 100.090425531915 187 1 99 0 2 188 1000 814 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 18817 340 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
1845244 1845244 PRJNA597223_P_NODE_84402_length_153_cov_1.754237_g82556_i0 PRJNA597223 84402 153 1.754237 2.68398261 Cryothecomonas sp. APCC MC5-1Cryo 741088 SAR_Eukaryotes SAR_Eukaryotes 230 5.39e-56   NTclustered gi|290760480|gb|GQ144683.1| 741088 g82556 i0 94.04 101.16339869281 151 9 99 0 1 151 1570 1720 Cryothecomonas sp. APCC MC5-1Cryo large subunit ribosomal RNA gene, partial sequence blastn 15478 230 1 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Protaspidae Cryothecomonas Cryothecomonas sp. APCC MC5-1Cryo
3119962 3119962 PRJNA597223_P_NODE_28043_length_288_cov_49.549407_g26197_i0 PRJNA597223 28043 288 49.549407 142.70229216 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 525 1.3099999999999996e-144   NTclustered gi|238617602|gb|FJ973377.1| 188950 g26197 i0 99.652 99.9375 287 1 99 0 2 288 309 23 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 28782 525 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4396526 4396526 PRJNA597223_P_NODE_25224_length_310_cov_8.665455_g23380_i0 PRJNA597223 25224 310 8.665455 26.8629105 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 289 2.03e-73   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g23380 i0 84.295 57.3064516129032 312 31 99 13 3 309 3696 3994 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 17765 289 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
4968912 4968912 PRJNA597223_P_NODE_72804_length_166_cov_21.732824_g70958_i0 PRJNA597223 72804 166 21.732824 36.07648784 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 307 2.69e-79   NTclustered gi|219524917|gb|EU709280.1| 555789 g70958 i0 100 100.692771084337 166 0 100 0 1 166 1380 1215 Bodomorpha sp. Panama105 18S ribosomal RNA gene, partial sequence blastn 16715 307 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. Panama105
8222373 8222373 PRJNA597223_P_NODE_45467_length_208_cov_82.653179_g43621_i0 PRJNA597223 45467 208 82.653179 171.91861232 Allas sp. (SA) 188948 SAR_Eukaryotes SAR_Eukaryotes 379 7.359999999999998e-101   NTclustered gi|33309613|gb|AF411263.1| 188948 g43621 i0 99.519 95.8461538461538 208 1 100 0 1 208 777 570 Allas sp. (SA) 18S ribosomal RNA gene, complete sequence blastn 19936 379 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Allas Allas sp. (SA)
8222751 8222751 PRJNA597223_P_NODE_79187_length_158_cov_7.113821_g77341_i0 PRJNA597223 79187 158 7.113821 11.23983718 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 289 9.14e-74   NTclustered gi|238617602|gb|FJ973377.1| 188950 g77341 i0 100 98.4810126582279 156 0 99 0 3 158 1155 1310 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 15560 289 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8222757 8222757 PRJNA597223_P_NODE_79967_length_158_cov_1.081301_g78121_i0 PRJNA597223 79967 158 1.081301 1.70845558 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 106 9.88e-19   NTclustered gi|238617602|gb|FJ973377.1| 188950 g78121 i0 80.556 4.74050632911392 144 22 89 6 17 157 1958 2098 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 749 106 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8793518 8793518 PRJNA597223_P_NODE_47167_length_204_cov_2.218935_g45321_i0 PRJNA597223 47167 204 2.218935 4.5266274 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 143 1.03e-29   NTclustered gi|48727796|gb|AY620286.1| 175275 g45321 i0 95.506 44.0735294117647 89 4 44 0 116 204 874 962 Uncultured cercozoan clone 6-2.7 small subunit ribosomal RNA gene, partial sequence blastn 8991 143 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
9497420 9497420 PRJNA597223_P_NODE_33768_length_253_cov_2.949541_g31922_i0 PRJNA597223 33768 253 2.949541 7.46233873 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 291 4.4699999999999996e-74   NTclustered gi|290760486|gb|GQ144689.1| 361427 g31922 i0 87.649 88.3715415019763 251 30 99 1 1 251 1927 1678 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 22358 291 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
10773160 10773160 PRJNA597223_P_NODE_17169_length_398_cov_8.887052_g15357_i0 PRJNA597223 17169 398 8.887052 35.37046696 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 243 2.1100000000000007e-59   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g15357 i0 94.34 42.3969849246231 159 7 40 2 238 396 3852 3696 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16874 243 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
11343998 11343998 PRJNA597223_P_NODE_25169_length_311_cov_2.525362_g23325_i0 PRJNA597223 25169 311 2.525362 7.85387582 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 152 2.79e-32   NTclustered gi|290760487|gb|GQ144690.1| 629762 g23325 i0 96.703 29.3054662379421 91 3 29 0 1 91 1405 1495 Cercozoa sp. CC-2009d large subunit ribosomal RNA gene, partial sequence blastn 9114 152 1 Eukaryota Sar   Cercozoa         Cercozoa sp. CC-2009d
14598518 14598518 PRJNA597223_S_NODE_1572_length_233_cov_1.974227_g1515_i0 PRJNA597223 1572 233 1.974227 4.59994891 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 431 2.2899999999999996e-116   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1515 i0 100 27.7381974248927 233 0 100 0 1 233 2167 2399 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 6463 431 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
15871539 15871539 PRJNA597223_P_NODE_16953_length_401_cov_11.877049_g15142_i0 PRJNA597223 16953 401 11.877049 47.62696649 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 298 4.47e-76   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g15142 i0 82.466 45.9600997506234 365 40 90 16 3 364 3696 4039 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 18430 298 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
15872224 15872224 PRJNA597223_P_NODE_82133_length_155_cov_2.450000_g80287_i0 PRJNA597223 82133 155 2.45 3.7975 Thaumatomonas seravini 188939 SAR_Eukaryotes SAR_Eukaryotes 287 3.21e-73   NTclustered gi|161015724|gb|EF681958.1| 188939 g80287 i0 100 88.1677419354839 155 0 100 0 1 155 1181 1027 Thaumatomonas seravini strain HFCC58 28S ribosomal RNA gene, partial sequence blastn 13666 287 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas seravini
17146705 17146705 PRJNA597223_P_NODE_35094_length_246_cov_25.393365_g33248_i0 PRJNA597223 35094 246 25.393365 62.4676779 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 444 3.14e-120   NTclustered gi|116222192|gb|DQ980477.1| 407209 g33248 i0 99.19 50.9593495934959 247 0 99 2 1 245 2316 2070 Thaumatomonas sp. TMT002 large subunit ribosomal RNA gene, partial sequence blastn 12536 444 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
17147032 17147032 PRJNA597223_P_NODE_64934_length_179_cov_2.208333_g63088_i0 PRJNA597223 64934 179 2.208333 3.95291607 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 111 2.47e-20   NTclustered gi|2651357801|gb|PP174314.1| 1979794 g63088 i0 85.321 5.19553072625698 109 14 61 2 4 112 4041 3935 Cercomonas sp. isolate P5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 930 111 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
17147323 17147323 PRJNA597223_S_NODE_274_length_535_cov_4.026210_g217_i0 PRJNA597223 274 535 4.02621 21.5402235 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 246 4e-81   NR ADK26622.1 323453 g217 i0 88.5 0.728971962616822 130 15 72.9 0 41 430 1 130 ADK26622.1 rps22a [Heteromita sp. PRA-74] diamond 390 246 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
19695209 19695209 PRJNA597223_P_NODE_12716_length_477_cov_8.502262_g10970_i0 PRJNA597223 12716 477 8.502262 40.55578974 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 880 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g10970 i0 100 21.6121593291405 476 0 99 0 2 477 806 331 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 10309 880 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19695240 19695240 PRJNA597223_P_NODE_15196_length_430_cov_16.126582_g13401_i0 PRJNA597223 15196 430 16.126582 69.3443026 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 608 1.959999999999999e-169   NTclustered gi|116222192|gb|DQ980477.1| 407209 g13401 i0 92.575 98.2418604651163 431 21 100 6 1 430 1588 2008 Thaumatomonas sp. TMT002 large subunit ribosomal RNA gene, partial sequence blastn 42244 608 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002
20267095 20267095 PRJNA597223_P_NODE_19436_length_368_cov_22.534535_g17608_i0 PRJNA597223 19436 368 22.534535 82.9270888 Thaumatomastigidae 45098 SAR_Eukaryotes SAR_Eukaryotes 617 2.7499999999999996e-172   NTclustered gi|33309605|gb|AF411259.1| 188939 g17608 i0 97.011 99.258152173913 368 10 100 1 1 368 403 37 Thaumatomonas seravini 18S ribosomal RNA gene, complete sequence blastn 36527 617 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas seravini
20267266 20267266 PRJNA597223_P_NODE_68396_length_173_cov_2.036232_g66550_i0 PRJNA597223 68396 173 2.036232 3.52268136 Rosculus 373137 SAR_Eukaryotes SAR_Eukaryotes 316 4.67e-82   NTclustered gi|2030163897|gb|MZ044034.1| 1808984 g66550 i0 100 31.0578034682081 171 0 99 0 2 172 230 400 Rosculus terrestris isolate S14D1 small subunit ribosomal RNA gene, partial sequence blastn 5373 316 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus terrestris
20971675 20971675 PRJNA597223_P_NODE_71097_length_169_cov_1.634328_g69251_i0 PRJNA597223 71097 169 1.634328 2.76201432 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 311 2.11e-80   NTclustered gi|238617602|gb|FJ973377.1| 188950 g69251 i0 100 58.7751479289941 168 0 99 0 1 168 1479 1646 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 9933 311 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20971904 20971904 PRJNA597223_S_NODE_1557_length_234_cov_2.692308_g1500_i0 PRJNA597223 1557 234 2.692308 6.30000072 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 433 6.41e-117   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1500 i0 100 87.5470085470085 234 0 100 0 1 234 321 88 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 20486 433 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
21542510 21542510 PRJNA597223_P_NODE_19797_length_364_cov_5.544073_g17966_i0 PRJNA597223 19797 364 5.544073 20.18042572 Thaumatomonas 45099 SAR_Eukaryotes SAR_Eukaryotes 638 2.08e-178   NTclustered gi|160688657|gb|EU138879.1| 352461 g17966 i0 98.347 81.5989010989011 363 6 99 0 1 363 1905 1543 Thaumatomonas coloniensis strain HFCC59 28S ribosomal RNA gene, partial sequence blastn 29702 638 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas coloniensis
22245974 22245974 PRJNA597223_P_NODE_18098_length_385_cov_7.920000_g16276_i0 PRJNA597223 18098 385 7.92 30.492 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 706 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g16276 i0 99.74 85.9974025974026 385 1 100 0 1 385 2115 1731 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 33109 706 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22246020 22246020 PRJNA597223_P_NODE_23158_length_328_cov_17.150171_g21315_i0 PRJNA597223 23158 328 17.150171 56.25256088 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 296 1.29e-75   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g21315 i0 83.801 56.9664634146341 321 43 98 8 3 323 3696 4007 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 18685 296 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
22246794 22246794 PRJNA597223_S_NODE_398_length_429_cov_4.723077_g341_i0 PRJNA597223 398 429 4.723077 20.26200033 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 765 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g341 i0 98.834 69.7715617715618 429 5 100 0 1 429 2103 1675 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 29932 765 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;