RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA597223", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA597223 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
569025 569025 PRJNA597223_P_NODE_34401_length_250_cov_1.813953_g32555_i0 PRJNA597223 34401 250 1.813953 4.5348825 Diplorchis hangzhouensis 1131906 Platyhelminthes Platyhelminthes 54.7 0.006   NTclustered gi|379771686|gb|JQ038227.1| 1131906 g32555 i0 100 0.116 29 0 12 0 95 123 5389 5361 Diplorchis hangzhouensis mitochondrion sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Diplorchis Diplorchis hangzhouensis
3692213 3692213 PRJNA597223_P_NODE_53603_length_190_cov_2.574194_g51757_i0 PRJNA597223 53603 190 2.574194 4.8909686 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 139 1.22e-28   NTclustered gi|2866376384|gb|PQ722296.1| 39377 g51757 i0 100 59 75 0 76 0 116 190 145 219 Stenostomum sp. (in: flatworms) isolate F8 small subunit ribosomal RNA gene, partial sequence blastn 11210 139 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sp. (in: flatworms)
10773852 10773852 PRJNA597223_P_NODE_80769_length_157_cov_1.229508_g78923_i0 PRJNA597223 80769 157 1.229508 1.93032756 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.013   NTclustered gi|690631090|emb|LN176327.1| 99802 g78923 i0 94.118 0.21656050955414 34 2 22 0 61 94 169 202 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0021147 blastn 34 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
17718487 17718487 PRJNA597223_P_NODE_26894_length_297_cov_2.835878_g25048_i0 PRJNA597223 26894 297 2.835878 8.42255766 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.7 4.55e-10   NTclustered gi|124784834|gb|EF201974.1| 60517 g25048 i0 80.189 15.7205387205387 106 19 35 2 1 105 179 283 Taenia asiatica clone HC2-A10 cytoplasmic antigen 1 mRNA, complete cds blastn 4669 78.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia asiatica
26636590 26636590 PRJNA597223_P_NODE_39321_length_229_cov_1.134021_g37475_i0 PRJNA597223 39321 229 1.134021 2.59690809 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 70.5 5.29e-12   NR PAA53525.1 282301 g37475 i0 47.9 1.91266375545852 73 38 95.6 0 226 8 261 333 PAA53525.1 hypothetical protein BOX15_Mlig001877g1 [Macrostomum lignano] diamond 438 70.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
31502146 31502146 PRJNA597223_P_NODE_45056_length_210_cov_1.411429_g43210_i0 PRJNA597223 45056 210 1.411429 2.9640009 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 115 1.22e-31   NR AAX30336.2 6182 g43210 i0 90 5.05714285714286 60 6 85.7 0 210 31 26 85 AAX30336.2 SJCHGC03028 protein, partial [Schistosoma japonicum] diamond 1062 115 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;