RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA597223", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA597223 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8222425 8222425 PRJNA597223_P_NODE_49767_length_198_cov_1.668712_g47921_i0 PRJNA597223 49767 198 1.668712 3.30404976 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 263 7.28e-66   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g47921 i0 92.818 2.96969696969697 181 13 97 0 15 195 5032789 5032609 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 588 263 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
27396102 27396102 PRJNA597223_P_NODE_78943_length_159_cov_1.419355_g77097_i0 PRJNA597223 78943 159 1.419355 2.25677445 Candidatus Xenobia bacterium 3036772 Bacteria Bacteria 41.2 0.0437   NR HEY3997724.1 3036772 g77097 i0 35.6 0.849056603773585 45 27 81.1 1 31 159 13 57 HEY3997724.1 SpoIIE family protein phosphatase [Candidatus Xenobia bacterium] diamond 135 41.2 1 Bacteria   Bacillati Vulcanimicrobiota Candidatus Xenobia       Candidatus Xenobia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;