contig_metadata
14 rows where bioproject = "PRJNA597223", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1140786 | 1140786 | PRJNA597223_P_NODE_75201_length_163_cov_2.828125_g73355_i0 | PRJNA597223 | 75201 | 163 | 2.828125 | 4.60984375 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 292 | 7.35e-75 | NTclustered | gi|1958638505|gb|MW498314.1| | 2100 | g73355 | i0 | 99.379 | 110.668711656442 | 161 | 1 | 99 | 0 | 1 | 161 | 2087 | 2247 | Mesomycoplasma hyorhinis strain MycSu128 23S ribosomal RNA gene, partial sequence | blastn | 18039 | 292 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 1844677 | 1844677 | PRJNA597223_P_NODE_3542_length_915_cov_16.075000_g2560_i0 | PRJNA597223 | 3542 | 915 | 16.075 | 147.08625 | Malacoplasma muris | 2119 | Bacteria | Bacteria | 880 | 0 | NTclustered | gi|299851933|gb|HM135461.1| | 2119 | g2560 | i0 | 86.849 | 127.497267759563 | 806 | 82 | 87 | 21 | 106 | 903 | 802 | 1591 | Mycoplasma muris strain ATCC 33757 23S ribosomal RNA gene, partial sequence | blastn | 116660 | 880 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma muris | |||
| 3120407 | 3120407 | PRJNA597223_P_NODE_70263_length_170_cov_2.118519_g68417_i0 | PRJNA597223 | 70263 | 170 | 2.118519 | 3.6014823 | Metamycoplasma faucium | 56142 | Bacteria | Bacteria | 135 | 1.37e-27 | NTclustered | gi|2708452869|gb|CP088155.1| | 56142 | g68417 | i0 | 88.889 | 1.07058823529412 | 117 | 4 | 68 | 4 | 1 | 115 | 309693 | 309584 | Metamycoplasma faucium strain UMCG-MFM1 chromosome, complete genome | blastn | 182 | 135 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium | |||
| 8222809 | 8222809 | PRJNA597223_P_NODE_84407_length_153_cov_1.754237_g82561_i0 | PRJNA597223 | 84407 | 153 | 1.754237 | 2.68398261 | Metamycoplasma faucium | 56142 | Bacteria | Bacteria | 283 | 4.0799999999999995e-72 | NTclustered | gi|2708452869|gb|CP088155.1| | 56142 | g82561 | i0 | 100 | 2 | 153 | 0 | 100 | 0 | 1 | 153 | 78850 | 79002 | Metamycoplasma faucium strain UMCG-MFM1 chromosome, complete genome | blastn | 306 | 283 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium | |||
| 11343959 | 11343959 | PRJNA597223_P_NODE_12349_length_485_cov_2262.397778_g10611_i0 | PRJNA597223 | 12349 | 485 | 2262.397778 | 10972.6292233 | Mollicutes | 31969 | Bacteria | Bacteria | 664 | 0 | NTclustered | gi|299851933|gb|HM135461.1| | 2119 | g10611 | i0 | 91.358 | 141.779381443299 | 486 | 40 | 100 | 2 | 1 | 485 | 969 | 485 | Mycoplasma muris strain ATCC 33757 23S ribosomal RNA gene, partial sequence | blastn | 68763 | 664 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma muris | |||
| 11344133 | 11344133 | PRJNA597223_P_NODE_67489_length_175_cov_0.942857_g65643_i0 | PRJNA597223 | 67489 | 175 | 0.942857 | 1.64999975 | Mollicutes | 31969 | Bacteria | Bacteria | 316 | 4.74e-82 | NTclustered | gi|1720621726|gb|CP035041.1| | 2100 | g65643 | i0 | 99.425 | 62.7257142857143 | 174 | 1 | 99 | 0 | 1 | 174 | 625923 | 626096 | Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome | blastn | 10977 | 318 | 0.993710691823899 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 14598146 | 14598146 | PRJNA597223_P_NODE_55612_length_189_cov_1.363636_g53766_i0 | PRJNA597223 | 55612 | 189 | 1.363636 | 2.57727204 | Mycoplasmopsis bovis | 28903 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|1951495622|gb|CP058497.1| | 28903 | g53766 | i0 | 100 | 0.158730158730159 | 30 | 0 | 16 | 0 | 85 | 114 | 655154 | 655183 | Mycoplasmopsis bovis strain Mb180 chromosome | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis bovis | |||
| 17146956 | 17146956 | PRJNA597223_P_NODE_56074_length_188_cov_2.333333_g54228_i0 | PRJNA597223 | 56074 | 188 | 2.333333 | 4.38666604 | Metamycoplasma faucium | 56142 | Bacteria | Bacteria | 324 | 3.09e-84 | NTclustered | gi|2921905358|gb|CP182786.1| | 56142 | g54228 | i0 | 98.37 | 9.36702127659574 | 184 | 3 | 98 | 0 | 5 | 188 | 270429 | 270246 | Metamycoplasma faucium strain DC-333 chromosome, complete genome | blastn | 1761 | 324 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium | |||
| 17147061 | 17147061 | PRJNA597223_P_NODE_67754_length_174_cov_2.230216_g65908_i0 | PRJNA597223 | 67754 | 174 | 2.230216 | 3.88057584 | Metamycoplasma faucium | 56142 | Bacteria | Bacteria | 193 | 8.269999999999999e-45 | NTclustered | gi|2708452869|gb|CP088155.1| | 56142 | g65908 | i0 | 98.182 | 2.11494252873563 | 110 | 2 | 100 | 0 | 1 | 110 | 74281 | 74390 | Metamycoplasma faucium strain UMCG-MFM1 chromosome, complete genome | blastn | 368 | 193 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium | |||
| 19695786 | 19695786 | PRJNA597223_P_NODE_66136_length_177_cov_1.894366_g64290_i0 | PRJNA597223 | 66136 | 177 | 1.894366 | 3.35302782 | Candidatus Phytoplasma fraxini | 35780 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2714275034|gb|CP146843.1| | 35780 | g64290 | i0 | 100 | 0.163841807909605 | 29 | 0 | 16 | 0 | 8 | 36 | 26051 | 26079 | Candidatus Phytoplasma fraxini isolate AshY1 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Candidatus Phytoplasma | Candidatus Phytoplasma fraxini | ||
| 20267123 | 20267123 | PRJNA597223_P_NODE_28776_length_283_cov_11.532258_g26930_i0 | PRJNA597223 | 28776 | 283 | 11.532258 | 32.63629014 | Mycoplasmoidales | 2790996 | Bacteria | Bacteria | 409 | 1.3499999999999998e-109 | NTclustered | gi|1563789200|emb|LR214962.1| | 2115 | g26930 | i0 | 93.165 | 324.752650176678 | 278 | 19 | 98 | 0 | 1 | 278 | 355586 | 355863 | Mycoplasma fermentans strain NCTC10117 genome assembly, chromosome: 8 | blastn | 91905 | 409 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis fermentans | |||
| 20267159 | 20267159 | PRJNA597223_P_NODE_3956_length_873_cov_11.151551_g2902_i0 | PRJNA597223 | 3956 | 873 | 11.151551 | 97.35304023 | Mycoplasmoidales | 2790996 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|1563789200|emb|LR214962.1| | 2115 | g2902 | i0 | 84.589 | 130.955326460481 | 863 | 112 | 98 | 8 | 1 | 859 | 358435 | 357590 | Mycoplasma fermentans strain NCTC10117 genome assembly, chromosome: 8 | blastn | 114324 | 846 | 0.994089834515366 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis fermentans | |||
| 20267178 | 20267178 | PRJNA597223_P_NODE_46236_length_206_cov_4.362573_g44390_i0 | PRJNA597223 | 46236 | 206 | 4.362573 | 8.98690038 | Bacteria | 2 | Bacteria | Bacteria | 372 | 1.2199999999999997e-98 | NTclustered | gi|1720621726|gb|CP035041.1| | 2100 | g44390 | i0 | 100 | 86.1990291262136 | 201 | 0 | 98 | 0 | 1 | 201 | 428875 | 429075 | Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome | blastn | 17757 | 372 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 20267308 | 20267308 | PRJNA597223_P_NODE_80116_length_157_cov_3.524590_g78270_i0 | PRJNA597223 | 80116 | 157 | 3.52459 | 5.5336063 | Mollicutes | 31969 | Bacteria | Bacteria | 281 | 1.52e-71 | NTclustered | gi|285179718|gb|GU417336.1| | 56142 | g78270 | i0 | 100 | 97.3503184713376 | 152 | 0 | 97 | 0 | 4 | 155 | 50 | 201 | Mycoplasma faucium clone WWP_SS7_G24 16S ribosomal RNA gene, partial sequence | blastn | 15284 | 281 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;