contig_metadata
10 rows where bioproject = "PRJNA597223", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 569641 | 569641 | PRJNA597223_P_NODE_9881_length_551_cov_138.372093_g8241_i0 | PRJNA597223 | 9881 | 551 | 138.372093 | 762.43023243 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 662 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g8241 | i0 | 89.326 | 139.693284936479 | 534 | 47 | 96 | 8 | 2 | 528 | 654873 | 655403 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 76971 | 662 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 10773334 | 10773334 | PRJNA597223_P_NODE_3449_length_927_cov_15.553812_g2478_i0 | PRJNA597223 | 3449 | 927 | 15.553812 | 144.18383724 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 259 | 5.1400000000000006e-64 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g2478 | i0 | 82.051 | 41.2308522114347 | 312 | 48 | 33 | 8 | 620 | 927 | 2059246 | 2059553 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 38221 | 259 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 10773748 | 10773748 | PRJNA597223_P_NODE_72009_length_168_cov_1.000000_g70163_i0 | PRJNA597223 | 72009 | 168 | 1 | 1.68 | Chlamydia sp. 12-3998_AO002 | 1608579 | Bacteria | Bacteria | 150 | 4.86e-32 | NTclustered | gi|795784157|emb|LN810465.1| | 1608579 | g70163 | i0 | 82.941 | 244.690476190476 | 170 | 25 | 100 | 4 | 1 | 168 | 258 | 91 | Chlamydia sp. 12-3998_AO002 partial 23S rRNA gene, isolate 12-3998_AO002 | blastn | 41108 | 150 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Chlamydia | Chlamydia sp. 12-3998_AO002 | |
| 15168804 | 15168804 | PRJNA597223_P_NODE_27672_length_291_cov_5.070312_g25826_i0 | PRJNA597223 | 27672 | 291 | 5.070312 | 14.75460792 | Chlamydiia | 204429 | Bacteria | Bacteria | 257 | 5.32e-64 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g25826 | i0 | 85.375 | 84.9381443298969 | 253 | 31 | 86 | 6 | 41 | 291 | 2366263 | 2366015 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 24717 | 259 | 0.992277992277992 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 18992250 | 18992250 | PRJNA597223_P_NODE_86235_length_151_cov_3.413793_g84389_i0 | PRJNA597223 | 86235 | 151 | 3.413793 | 5.15482743 | Parachlamydiales | 1963360 | Bacteria | Bacteria | 95.3 | 2.02e-15 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g84389 | i0 | 92.424 | 10.6026490066225 | 66 | 5 | 44 | 0 | 6 | 71 | 1215 | 1280 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 1601 | 95.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 21542535 | 21542535 | PRJNA597223_P_NODE_26977_length_296_cov_6.704981_g25131_i0 | PRJNA597223 | 26977 | 296 | 6.704981 | 19.84674376 | Parachlamydia | 83551 | Bacteria | Bacteria | 444 | 3.88e-120 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g25131 | i0 | 93.878 | 159.148648648649 | 294 | 18 | 99 | 0 | 3 | 296 | 2946 | 2653 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 47108 | 444 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 22817822 | 22817822 | PRJNA597223_P_NODE_15298_length_428_cov_8.399491_g13502_i0 | PRJNA597223 | 15298 | 428 | 8.399491 | 35.94982148 | Chlamydiia | 204429 | Bacteria | Bacteria | 516 | 1.22e-141 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g13502 | i0 | 89.398 | 141.588785046729 | 415 | 37 | 96 | 7 | 2 | 412 | 2060622 | 2061033 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 60600 | 516 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 23521378 | 23521378 | PRJNA597223_P_NODE_35359_length_245_cov_2.585714_g33513_i0 | PRJNA597223 | 35359 | 245 | 2.585714 | 6.3349993 | Candidatus Protochlamydia amoebophila | 362787 | Bacteria | Bacteria | 311 | 3.3000000000000003e-80 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g33513 | i0 | 89.712 | 37.1387755102041 | 243 | 25 | 99 | 0 | 2 | 244 | 2154021 | 2153779 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 9099 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 29763755 | 29763755 | PRJNA597223_P_NODE_19651_length_366_cov_2.870091_g17820_i0 | PRJNA597223 | 19651 | 366 | 2.870091 | 10.50453306 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 75.5 | 5.14e-13 | NR | HEV7737122.1 | 2047757 | g17820 | i0 | 66.1 | 2.29508196721311 | 56 | 19 | 45.9 | 0 | 199 | 366 | 137 | 192 | HEV7737122.1 reverse transcriptase family protein [Chlamydiales bacterium] | diamond | 840 | 75.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31944612 | 31944612 | PRJNA597223_P_NODE_52017_length_193_cov_2.012658_g50171_i0 | PRJNA597223 | 52017 | 193 | 2.012658 | 3.88442994 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 42 | 0.0149 | NR | MDR3624086.1 | 2047757 | g50171 | i0 | 84.6 | 0.823834196891192 | 26 | 4 | 40.4 | 0 | 185 | 108 | 41 | 66 | MDR3624086.1 histone [Chlamydiales bacterium] | diamond | 159 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;