RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA597223", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 14 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 14 ✖

bioproject 1

  • PRJNA597223 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3120038 3120038 PRJNA597223_P_NODE_34963_length_247_cov_2.580189_g33117_i0 PRJNA597223 34963 247 2.580189 6.37306683 Lecane bulla 96446 Rotifera other_Eukaryota 455 1.4600000000000002e-123   NTclustered gi|83285086|gb|DQ297698.1| 96446 g33117 i0 100 99.5991902834008 246 0 99 0 2 247 866 621 Lecane bulla 18S ribosomal RNA gene, partial sequence blastn 24601 455 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
5672823 5672823 PRJNA597223_P_NODE_36105_length_242_cov_1.898551_g34259_i0 PRJNA597223 36105 242 1.898551 4.59449342 Adineta vaga 104782 Rotifera other_Eukaryota 228 3.3699999999999986e-55   NTclustered gi|187233665|gb|EU643499.1| 104782 g34259 i0 90.395 0.731404958677686 177 11 73 1 66 242 443 273 Adineta vaga ribosomal protein L26 mRNA, partial cds blastn 177 228 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
20267078 20267078 PRJNA597223_P_NODE_10296_length_539_cov_4.636905_g8632_i0 PRJNA597223 10296 539 4.636905 24.99291795 Eurotatoria 2816136 Rotifera other_Eukaryota 924 0   NTclustered gi|37785582|gb|AY210469.1| 96448 g8632 i0 97.765 45.0760667903525 537 10 99 1 1 535 1847 2383 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 24296 924 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
27995906 27995906 PRJNA597223_P_NODE_165_length_2979_cov_7.500340_g102_i0 PRJNA597223 165 2979 7.50034 223.4351286 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 447 1.2499999999999999e-131   NR CAF2516721.1 2762512 g102 i0 41 1.90936555891239 632 346 61.3 9 1831 5 337 964 CAF2516721.1 unnamed protein product [Rotaria sp. Silwood2] diamond 5688 447 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
28659027 28659027 PRJNA597223_P_NODE_52107_length_193_cov_1.670886_g50261_i0 PRJNA597223 52107 193 1.670886 3.22480998 Adineta steineri 433720 Rotifera other_Eukaryota 47.4 3.73e-4   NR CAF0761518.1 433720 g50261 i0 40.6 0.994818652849741 64 36 96.4 1 3 188 146 209 CAF0761518.1 unnamed protein product [Adineta steineri] diamond 192 47.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
28829972 28829972 PRJNA597223_P_NODE_79488_length_158_cov_2.032520_g77642_i0 PRJNA597223 79488 158 2.03252 3.2113816 Rotaria 231623 Rotifera other_Eukaryota 55.5 3.21e-7   NR CAF1623482.1 392030 g77642 i0 48.1 20.7341772151899 52 27 98.7 0 156 1 109 160 CAF1623482.1 unnamed protein product [Rotaria magnacalcarata] diamond 3276 55.8 0.99462365591397806 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29227423 29227423 PRJNA597223_P_NODE_11289_length_512_cov_8.090147_g870_i6 PRJNA597223 11289 512 8.090147 41.42155264 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 68.6 6.1e-10   NR CAF0993919.1 104777 g870 i6 42 4.787109375 88 48 49.8 3 441 187 147 234 CAF0993919.1 unnamed protein product [Brachionus calyciflorus] diamond 2451 68.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
29290297 29290297 PRJNA597223_P_NODE_45089_length_210_cov_1.102857_g43243_i0 PRJNA597223 45089 210 1.102857 2.3159997 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 49.3 1.19e-4   NR CAF2158178.1 392030 g43243 i0 45.5 3.14285714285714 55 30 78.6 0 208 44 751 805 CAF2158178.1 unnamed protein product [Rotaria magnacalcarata] diamond 660 49.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29542854 29542854 PRJNA597223_P_NODE_76690_length_161_cov_7.269841_g74844_i0 PRJNA597223 76690 161 7.269841 11.70444401 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 64.3 2.92e-10   NR CAF1461519.1 1234261 g74844 i0 56 0.93167701863354 50 22 93.2 0 161 12 240 289 CAF1461519.1 unnamed protein product [Didymodactylos carnosus] diamond 150 64.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30269701 30269701 PRJNA597223_S_NODE_352_length_458_cov_2.439141_g295_i0 PRJNA597223 352 458 2.439141 11.17126578 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 155 1.17e-41   NR CAF0943747.1 1234261 g295 i0 54.9 1.99781659388646 153 65 99.6 3 456 1 366 515 CAF0943747.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 915 155 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30743339 30743339 PRJNA597223_P_NODE_53494_length_190_cov_2.864516_g51648_i0 PRJNA597223 53494 190 2.864516 5.4425804 Adineta steineri 433720 Rotifera other_Eukaryota 41.2 0.0414   NR CAF4188438.1 433720 g51648 i0 66.7 0.378947368421053 24 8 37.9 0 2 73 122 145 CAF4188438.1 unnamed protein product, partial [Adineta steineri] diamond 72 41.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
31198587 31198587 PRJNA597223_P_NODE_14555_length_442_cov_2.641278_g12767_i0 PRJNA597223 14555 442 2.641278 11.67444876 root 1 Root_unresolved Root_unresolved 137 2.8e-34   NR CAF0790135.1 104777 g12767 i0 46.2 15.5904977375566 158 73 99.1 1 439 2 389 546 CAF0790135.1 unnamed protein product [Brachionus calyciflorus] diamond 6891 138 0.992753623188406 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
31343860 31343860 PRJNA597223_P_NODE_65536_length_178_cov_2.000000_g63690_i0 PRJNA597223 65536 178 2 3.56 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 59.7 1.65e-8   NR CAF3329596.1 2762512 g63690 i0 58.1 9.42134831460674 43 18 72.5 0 139 11 422 464 CAF3329596.1 unnamed protein product [Rotaria sp. Silwood2] diamond 1677 59.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
32577718 32577718 PRJNA597223_P_NODE_7839_length_624_cov_3.027165_g6335_i0 PRJNA597223 7839 624 3.027165 18.8895096 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 119 6.2100000000000006e-27   NR CAF4517623.1 2762512 g6335 i0 52 1.41346153846154 98 47 47.1 0 324 617 193 290 CAF4517623.1 unnamed protein product [Rotaria sp. Silwood2] diamond 882 119 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;