contig_metadata
24 rows where bioproject = "PRJNA597223" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2416078 | 2416078 | PRJNA597223_P_NODE_47522_length_203_cov_2.440476_g45676_i0 | PRJNA597223 | 47522 | 203 | 2.440476 | 4.95416628 | Bacteria | 2 | Bacteria | Bacteria | 141 | 3.67e-29 | NTclustered | gi|563351663|gb|CP006913.1| | 1394709 | g45676 | i0 | 95.455 | 8.12315270935961 | 88 | 4 | 43 | 0 | 2 | 89 | 127357 | 127270 | Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome | blastn | 1649 | 141 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | candidate division SR1 bacterium RAAC1_SR1_1 | ||||||
| 3119976 | 3119976 | PRJNA597223_P_NODE_29643_length_278_cov_1.489712_g27797_i0 | PRJNA597223 | 29643 | 278 | 1.489712 | 4.14139936 | Candidatus Southlakia epibionticum | 3043284 | Bacteria | Bacteria | 433 | 7.82e-117 | NTclustered | gi|2516687873|gb|CP124550.1| | 3043284 | g27797 | i0 | 95.255 | 62.6510791366906 | 274 | 11 | 98 | 2 | 7 | 278 | 151712 | 151985 | Candidatus Southlakia epibionticum strain ML1 chromosome, complete genome | blastn | 17417 | 433 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Southlakia | Candidatus Southlakia epibionticum | ||
| 9497612 | 9497612 | PRJNA597223_P_NODE_49368_length_199_cov_1.530488_g47522_i0 | PRJNA597223 | 49368 | 199 | 1.530488 | 3.04567112 | Candidatus Saccharibacteria genomosp. TM7-H1 | 2080739 | Bacteria | Bacteria | 366 | 5.43e-97 | NTclustered | gi|1566427536|gb|CP026537.1| | 2080739 | g47522 | i0 | 100 | 66.9899497487437 | 198 | 0 | 99 | 0 | 2 | 199 | 543466 | 543663 | Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome | blastn | 13331 | 366 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria genomosp. TM7-H1 | ||||||
| 10773476 | 10773476 | PRJNA597223_P_NODE_47429_length_203_cov_3.821429_g45583_i0 | PRJNA597223 | 47429 | 203 | 3.821429 | 7.75750087 | Candidatus Peribacteria bacterium | 2053688 | Bacteria | Bacteria | 202 | 1.66e-47 | NTclustered | gi|2258833497|gb|CP060226.1| | 2053688 | g45583 | i0 | 85.075 | 5.60098522167488 | 201 | 26 | 98 | 4 | 1 | 199 | 813687 | 813885 | MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome | blastn | 1137 | 202 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peribacteria | Candidatus Peribacteria bacterium | |||||
| 13322923 | 13322923 | PRJNA597223_P_NODE_32931_length_257_cov_9.427928_g31085_i0 | PRJNA597223 | 32931 | 257 | 9.427928 | 24.22977496 | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 | 1619070 | Bacteria | Bacteria | 339 | 1.5999999999999998e-88 | NTclustered | gi|837350690|gb|CP011211.1| | 1619070 | g31085 | i0 | 90.625 | 132.533073929961 | 256 | 22 | 99 | 2 | 2 | 256 | 849841 | 850095 | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome | blastn | 34061 | 339 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 | ||||||
| 13894839 | 13894839 | PRJNA597223_P_NODE_68191_length_173_cov_3.978261_g66345_i0 | PRJNA597223 | 68191 | 173 | 3.978261 | 6.88239153 | Bacteria | 2 | Bacteria | Bacteria | 254 | 3.71e-63 | NTclustered | gi|1958070929|gb|CP064991.1| | 2026720 | g66345 | i0 | 93.103 | 185.71676300578 | 174 | 10 | 100 | 2 | 1 | 173 | 84232 | 84404 | Candidatus Saccharibacteria bacterium isolate Hirt_18-Q3-R61-65_BAT3C.362_fly chromosome, complete genome | blastn | 32129 | 254 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 14597764 | 14597764 | PRJNA597223_P_NODE_21552_length_344_cov_6.792880_g19713_i0 | PRJNA597223 | 21552 | 344 | 6.79288 | 23.3675072 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 520 | 7.419999999999998e-143 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g19713 | i0 | 95.413 | 74.8924418604651 | 327 | 13 | 95 | 2 | 3 | 329 | 137787 | 137463 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 25763 | 520 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 14598286 | 14598286 | PRJNA597223_P_NODE_70512_length_170_cov_1.325926_g68666_i0 | PRJNA597223 | 70512 | 170 | 1.325926 | 2.2540742 | Candidatus Peribacteria bacterium | 2053688 | Bacteria | Bacteria | 152 | 1.36e-32 | NTclustered | gi|2258832001|gb|CP060225.1| | 2053688 | g68666 | i0 | 83.041 | 1.00588235294118 | 171 | 26 | 99 | 3 | 1 | 169 | 627368 | 627199 | MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-9 chromosome, complete genome | blastn | 171 | 152 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peribacteria | Candidatus Peribacteria bacterium | |||||
| 20267216 | 20267216 | PRJNA597223_P_NODE_54516_length_189_cov_3.123377_g52670_i0 | PRJNA597223 | 54516 | 189 | 3.123377 | 5.90318253 | Bacteria | 2 | Bacteria | Bacteria | 99 | 2.05e-16 | NTclustered | gi|1958118994|gb|CP065013.1| | 2026720 | g52670 | i0 | 93.846 | 42.2857142857143 | 65 | 4 | 34 | 0 | 120 | 184 | 210214 | 210278 | Candidatus Saccharibacteria bacterium isolate Ribe_18-Q3-R11-54_BATAC.540_fly chromosome, complete genome | blastn | 7992 | 99 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 26763324 | 26763324 | PRJNA597223_P_NODE_76161_length_162_cov_2.188976_g74315_i0 | PRJNA597223 | 76161 | 162 | 2.188976 | 3.54614112 | Candidatus Glassbacteria bacterium | 2602803 | Bacteria | Bacteria | 43.9 | 0.00118 | NR | HUU89496.1 | 2602803 | g74315 | i0 | 51.3 | 0.722222222222222 | 39 | 18 | 72.2 | 1 | 43 | 159 | 7 | 44 | HUU89496.1 hypothetical protein [Candidatus Glassbacteria bacterium] | diamond | 117 | 43.9 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Glassiibacteriota | Candidatus Glassbacteria bacterium | ||||||
| 27459218 | 27459218 | PRJNA597223_P_NODE_84863_length_153_cov_0.940678_g83017_i0 | PRJNA597223 | 84863 | 153 | 0.940678 | 1.43923734 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 41.6 | 0.0043 | NR | MEX0594971.1 | 2053589 | g83017 | i0 | 53.6 | 0.549019607843137 | 28 | 13 | 54.9 | 0 | 54 | 137 | 5 | 32 | MEX0594971.1 hypothetical protein [Candidatus Paceibacterota bacterium] | diamond | 84 | 41.6 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium | ||||||
| 27553513 | 27553513 | PRJNA597223_P_NODE_69684_length_171_cov_1.941176_g67838_i0 | PRJNA597223 | 69684 | 171 | 1.941176 | 3.31941096 | Candidatus Saccharimonadales bacterium | 2973664 | Bacteria | Bacteria | 58.2 | 4.98e-9 | NR | HSE29480.1 | 2973664 | g67838 | i0 | 68.8 | 0.56140350877193 | 32 | 10 | 56.1 | 0 | 102 | 7 | 32 | 63 | HSE29480.1 hypothetical protein [Candidatus Saccharimonadales bacterium] | diamond | 96 | 58.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadales bacterium | ||||
| 27648653 | 27648653 | PRJNA597223_P_NODE_54804_length_189_cov_2.441558_g52958_i0 | PRJNA597223 | 54804 | 189 | 2.441558 | 4.61454462 | Candidatus Dependentiae bacterium Noda2 | 2030827 | Bacteria | Bacteria | 50.8 | 2.06e-6 | NR | BDC34346.1 | 2891165 | g52958 | i0 | 91.7 | 0.380952380952381 | 24 | 2 | 38.1 | 0 | 3 | 74 | 46 | 69 | BDC34346.1 NifU family protein [Candidatus Dependentiae bacterium Noda2021] | diamond | 72 | 50.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Dependentiae bacterium Noda2021 | |||||||
| 27806580 | 27806580 | PRJNA597223_P_NODE_61884_length_185_cov_1.233333_g60038_i0 | PRJNA597223 | 61884 | 185 | 1.233333 | 2.28166605 | Candidatus Methylomirabilota bacterium | 2072417 | Bacteria | Bacteria | 42.7 | 0.0156 | NR | HVR35843.1 | 2072417 | g60038 | i0 | 80 | 1.21621621621622 | 35 | 6 | 55.1 | 1 | 84 | 185 | 1 | 35 | HVR35843.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Candidatus Methylomirabilota bacterium] | diamond | 225 | 42.7 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Methylomirabilota | Candidatus Methylomirabilota bacterium | ||||||
| 28627542 | 28627542 | PRJNA597223_P_NODE_76327_length_162_cov_1.685039_g74481_i0 | PRJNA597223 | 76327 | 162 | 1.685039 | 2.72976318 | Candidatus Absconditabacterales bacterium | 2927939 | Bacteria | Bacteria | 59.7 | 7.1e-10 | NR | HMS90702.1 | 2927939 | g74481 | i0 | 54.2 | 0.888888888888889 | 48 | 22 | 88.9 | 0 | 161 | 18 | 24 | 71 | HMS90702.1 hypothetical protein [Candidatus Absconditabacterales bacterium] | diamond | 144 | 59.7 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | Candidatus Absconditabacterales | Candidatus Absconditabacterales bacterium | |||||
| 29290290 | 29290290 | PRJNA597223_P_NODE_31689_length_265_cov_1.513043_g29843_i0 | PRJNA597223 | 31689 | 265 | 1.513043 | 4.00956395 | Candidatus Absconditabacterales bacterium | 2927939 | Bacteria | Bacteria | 46.2 | 2.71e-4 | NR | HMS90623.1 | 2927939 | g29843 | i0 | 44.2 | 0.486792452830189 | 43 | 24 | 48.7 | 0 | 251 | 123 | 11 | 53 | HMS90623.1 hypothetical protein [Candidatus Absconditabacterales bacterium] | diamond | 129 | 46.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Absconditibacteriota | Candidatus Absconditabacterales | Candidatus Absconditabacterales bacterium | |||||
| 29542852 | 29542852 | PRJNA597223_P_NODE_7210_length_649_cov_3.024430_g5751_i0 | PRJNA597223 | 7210 | 649 | 3.02443 | 19.6285507 | Candidatus Parcubacteria bacterium | 2762014 | Bacteria | Bacteria | 102 | 6.230000000000001e-21 | NR | MEN9524269.1 | 2762014 | g5751 | i0 | 43.2 | 1.03543913713405 | 118 | 62 | 52.2 | 2 | 214 | 552 | 959 | 1076 | MEN9524269.1 hypothetical protein [Candidatus Parcubacteria bacterium] | diamond | 672 | 102 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Parcubacteria | Candidatus Parcubacteria bacterium | ||||||
| 29953499 | 29953499 | PRJNA597223_P_NODE_71791_length_168_cov_1.511278_g69945_i0 | PRJNA597223 | 71791 | 168 | 1.511278 | 2.53894704 | Minisyncoccota bacterium | 2053589 | Bacteria | Bacteria | 75.1 | 9.85e-16 | NR | HEY5588396.1 | 2053589 | g69945 | i0 | 72.9 | 0.857142857142857 | 48 | 13 | 85.7 | 0 | 23 | 166 | 1 | 48 | HEY5588396.1 VRR-NUC domain-containing protein [Candidatus Paceibacterota bacterium] | diamond | 144 | 75.1 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccota bacterium | ||||||
| 30111375 | 30111375 | PRJNA597223_P_NODE_41632_length_220_cov_4.162162_g39786_i0 | PRJNA597223 | 41632 | 220 | 4.162162 | 9.1567564 | Candidatus Peregrinibacteria bacterium GW2 | 2030811 | Bacteria | Bacteria | 53.1 | 2.23e-6 | NR | KKT76633.1 | 1619057 | g39786 | i0 | 60 | 0.545454545454545 | 40 | 16 | 54.5 | 0 | 95 | 214 | 120 | 159 | KKT76633.1 MAG: hypothetical protein UW70_C0016G0012 [Candidatus Peregrinibacteria bacterium GW2011_GWA2_44_7] | diamond | 120 | 53.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peregrinibacteria bacterium GW2011_GWA2_44_7 | ||||||
| 30364636 | 30364636 | PRJNA597223_P_NODE_85972_length_152_cov_0.982906_g84126_i0 | PRJNA597223 | 85972 | 152 | 0.982906 | 1.49401712 | Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_ | 2053523 | Bacteria | Bacteria | 43.5 | 0.00577 | NR | OGY10064.1 | 1797513 | g84126 | i0 | 41.9 | 2.42763157894737 | 43 | 25 | 84.9 | 0 | 146 | 18 | 37 | 79 | OGY10064.1 MAG: hypothetical protein A2782_04085 [Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15b] | diamond | 369 | 43.5 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Blackburniibacteriota | Candidatus Blackburnbacteria bacterium RIFCSPHIGHO2_01_FULL_43_15b | ||||||
| 30585212 | 30585212 | PRJNA597223_P_NODE_53753_length_190_cov_2.258065_g51907_i0 | PRJNA597223 | 53753 | 190 | 2.258065 | 4.2903235 | Candidatus Nanoperiomorbus periodonticus | 2171989 | Bacteria | Bacteria | 53.1 | 3.9e-6 | NR | WP_129619389.1 | 2171989 | g51907 | i0 | 100 | 0.394736842105263 | 25 | 0 | 39.5 | 0 | 1 | 75 | 366 | 390 | WP_129619389.1 AI-2E family transporter [Candidatus Nanoperiomorbus periodonticus] | diamond | 75 | 53.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Nanoperiomorbia | Candidatus Nanoperiomorbales | Candidatus Nanoperiomorbaceae | Candidatus Nanoperiomorbus | Candidatus Nanoperiomorbus periodonticus | ||
| 31533795 | 31533795 | PRJNA597223_P_NODE_41556_length_221_cov_1.526882_g39710_i0 | PRJNA597223 | 41556 | 221 | 1.526882 | 3.37440922 | Candidatus Saccharibacteria bacterium CPR2 | 2293640 | Bacteria | Bacteria | 63.2 | 3.73e-10 | NR | MCE7936663.1 | 2293640 | g39710 | i0 | 50.9 | 2.57918552036199 | 55 | 22 | 74.7 | 1 | 213 | 49 | 129 | 178 | MCE7936663.1 hypothetical protein [Candidatus Saccharibacteria bacterium CPR2] | diamond | 570 | 63.2 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium CPR2 | ||||||
| 31723289 | 31723289 | PRJNA597223_S_NODE_2417_length_197_cov_2.037975_g2360_i0 | PRJNA597223 | 2417 | 197 | 2.037975 | 4.01481075 | Candidatus Aminicenantes bacterium | 2052149 | Bacteria | Bacteria | 42 | 0.0324 | NR | MCJ7588866.1 | 2052149 | g2360 | i0 | 38.6 | 0.868020304568528 | 57 | 32 | 82.2 | 1 | 19 | 180 | 125 | 181 | MCJ7588866.1 site-specific integrase [Candidatus Aminicenantes bacterium] | diamond | 171 | 42 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Aminicenantota | Candidatus Aminicenantes bacterium | ||||||
| 31881376 | 31881376 | PRJNA597223_P_NODE_75617_length_163_cov_1.492188_g73771_i0 | PRJNA597223 | 75617 | 163 | 1.492188 | 2.43226644 | Minisyncoccia bacterium | 3120121 | Bacteria | Bacteria | 81.6 | 3.18e-17 | NR | MFT5533230.1 | 3120121 | g73771 | i0 | 82.2 | 4.23312883435583 | 45 | 8 | 82.8 | 0 | 135 | 1 | 29 | 73 | MFT5533230.1 Fe-Mn family superoxide dismutase [Minisyncoccia bacterium] | diamond | 690 | 81.6 | 1 | Bacteria | Bacteria candidate phyla | Minisyncoccota | Minisyncoccia | Minisyncoccia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;