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contig_metadata

38 rows where bioproject = "PRJNA596870" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 38 ✖

bioproject 1

  • PRJNA596870 · 38 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
568590 568590 PRJNA596870_P_NODE_36601_length_244_cov_0.900585_g36468_i0 PRJNA596870 36601 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 155 5.029999999999999e-42   NR MDP2435174.1 1906665 g36468 i0 97.5 0.983606557377049 80 2 98.4 0 242 3 337 416 MDP2435174.1 molecular chaperone DnaK [archaeon] diamond 240 155 1 Archaea               archaeon
6946998 6946998 PRJNA596870_P_NODE_9306_length_412_cov_1.362832_g9173_i0 PRJNA596870 9306 412 1.362832 5.61486784 archaeon 1906665 Archaea Archaea 223 4.63e-72   NR MDP2438187.1 1906665 g9173 i0 91.1 0.895631067961165 123 11 89.6 0 373 5 1 123 MDP2438187.1 30S ribosomal protein S17e [archaeon] diamond 369 223 1 Archaea               archaeon
10772817 10772817 PRJNA596870_P_NODE_32409_length_248_cov_0.880000_g32276_i0 PRJNA596870 32409 248 0.88 2.1824 Thermoplasma volcanium 50339 Archaea Archaea 52.8 0.022   NTclustered gi|47118327|dbj|BA000011.4| 273116 g32276 i0 94.118 0.137096774193548 34 2 14 0 59 92 457698 457731 Thermoplasma volcanium GSS1 DNA, complete genome blastn 34 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Thermoplasmataceae Thermoplasma Thermoplasma volcanium
12047206 12047206 PRJNA596870_P_NODE_10030_length_399_cov_1.383436_g9897_i0 PRJNA596870 10030 399 1.383436 5.51990964 archaeon 1906665 Archaea Archaea 256 1.7699999999999996e-81   NR MDP2436508.1 1906665 g9897 i0 95.5 0.992481203007519 132 6 99.2 0 398 3 102 233 MDP2436508.1 translation elongation factor EF-1 subunit alpha [archaeon] diamond 396 256 1 Archaea               archaeon
17145782 17145782 PRJNA596870_P_NODE_13014_length_358_cov_1.014035_g12881_i0 PRJNA596870 13014 358 1.014035 3.6302453 archaeon 1906665 Archaea Archaea 175 7.52e-51   NR MDP2438254.1 1906665 g12881 i0 77.3 0.99720670391061506 119 27 99.7 0 358 2 111 229 MDP2438254.1 50S ribosomal protein L4 [archaeon] diamond 357 175 1 Archaea               archaeon
21542461 21542461 PRJNA596870_P_NODE_40097_length_241_cov_0.916667_g39964_i0 PRJNA596870 40097 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 174 5.97e-51   NR MDP2436715.1 1906665 g39964 i0 96.3 0.995850622406639 80 3 99.6 0 240 1 60 139 MDP2436715.1 hypothetical protein [archaeon] diamond 240 174 1 Archaea               archaeon
22245400 22245400 PRJNA596870_P_NODE_20058_length_298_cov_1.706667_g19925_i0 PRJNA596870 20058 298 1.706667 5.08586766 archaeon 1906665 Archaea Archaea 141 3.92e-41   NR MDP2436333.1 1906665 g19925 i0 84 0.815436241610738 81 13 81.5 0 243 1 1 81 MDP2436333.1 30S ribosomal protein S10 [archaeon] diamond 243 141 1 Archaea               archaeon
23520922 23520922 PRJNA596870_P_NODE_35239_length_246_cov_0.890173_g35106_i0 PRJNA596870 35239 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 104 3.73e-26   NR MDP2437554.1 1906665 g35106 i0 72.7 0.939024390243902 77 15 92.7 2 2 229 37 108 MDP2437554.1 hypothetical protein [archaeon] diamond 231 104 1 Archaea               archaeon
26668056 26668056 PRJNA596870_P_NODE_19941_length_299_cov_1.362832_g19808_i0 PRJNA596870 19941 299 1.362832 4.07486768 archaeon 1906665 Archaea Archaea 95.5 6.449999999999999e-23   NR MDP2439215.1 1906665 g19808 i0 66.2 0.712374581939799 71 23 70.2 1 2 211 52 122 MDP2439215.1 elongin-C [archaeon] diamond 213 95.5 1 Archaea               archaeon
26795036 26795036 PRJNA596870_P_NODE_34701_length_246_cov_0.890173_g34568_i0 PRJNA596870 34701 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 113 6.3200000000000006e-27   NR MDP2435572.1 1906665 g34568 i0 63.9 1.01219512195122 83 28 98.8 1 245 3 280 362 MDP2435572.1 filamin/ABP280 repeat domain-containing protein [archaeon] diamond 249 113 1 Archaea               archaeon
26953095 26953095 PRJNA596870_P_NODE_10682_length_388_cov_1.466667_g10549_i0 PRJNA596870 10682 388 1.466667 5.69066796 archaeon 1906665 Archaea Archaea 117 3.77e-29   NR MDP2439784.1 1906665 g10549 i0 81.2 0.533505154639175 69 12 52.6 1 383 180 57 125 MDP2439784.1 hypothetical protein [archaeon] diamond 207 117 1 Archaea               archaeon
27079822 27079822 PRJNA596870_P_NODE_29142_length_251_cov_0.865169_g29009_i0 PRJNA596870 29142 251 0.865169 2.17157419 Thermoplasmata archaeon 1906666 Archaea Archaea 43.5 0.0223   NR HZY70575.1 1906666 g29009 i0 46.8 0.561752988047809 47 21 56.2 2 237 97 615 657 HZY70575.1 aconitate hydratase AcnA [Thermoplasmata archaeon] diamond 141 43.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27111280 27111280 PRJNA596870_P_NODE_34522_length_246_cov_0.890173_g34389_i0 PRJNA596870 34522 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 150 3.209999999999999e-43   NR MDP2437677.1 1906665 g34389 i0 80.5 1 82 16 100 0 246 1 177 258 MDP2437677.1 serine/threonine-protein kinase [archaeon] diamond 246 150 1 Archaea               archaeon
27269409 27269409 PRJNA596870_P_NODE_22963_length_282_cov_1.105263_g22830_i0 PRJNA596870 22963 282 1.105263 3.11684166 archaeon 1906665 Archaea Archaea 72 5.88e-13   NR MDP2439116.1 1906665 g22830 i0 56.3 0.75531914893617 71 28 75.5 2 213 1 1 68 MDP2439116.1 EF-hand domain-containing protein [archaeon] diamond 213 72 1 Archaea               archaeon
27585322 27585322 PRJNA596870_P_NODE_18224_length_311_cov_1.294118_g18091_i0 PRJNA596870 18224 311 1.294118 4.02470698 archaeon 1906665 Archaea Archaea 197 6.9e-62   NR MDP2434978.1 1906665 g18091 i0 87.4 0.993569131832797 103 13 99.4 0 310 2 94 196 MDP2434978.1 glycoside hydrolase family 25 protein [archaeon] diamond 309 197 1 Archaea               archaeon
27617028 27617028 PRJNA596870_P_NODE_29204_length_251_cov_0.865169_g29071_i0 PRJNA596870 29204 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 130 3.5500000000000004e-33   NR MDP2438735.1 1906665 g29071 i0 79 0.968127490039841 81 13 95.6 2 12 251 21 98 MDP2438735.1 BTB/POZ domain-containing protein [archaeon] diamond 243 130 1 Archaea               archaeon
27743503 27743503 PRJNA596870_P_NODE_20104_length_298_cov_1.160000_g19971_i0 PRJNA596870 20104 298 1.16 3.4568 archaeon 1906665 Archaea Archaea 145 1.43e-42   NR MDP2438488.1 1906665 g19971 i0 76.4 0.895973154362416 89 21 89.6 0 269 3 1 89 MDP2438488.1 KOW motif-containing protein [archaeon] diamond 267 145 1 Archaea               archaeon
28248200 28248200 PRJNA596870_P_NODE_35046_length_246_cov_0.890173_g34913_i0 PRJNA596870 35046 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 52 9.53e-6   NR MDP2439400.1 1906665 g34913 i0 31.8 0.804878048780488 66 44 79.3 1 196 2 18 83 MDP2439400.1 hypothetical protein [archaeon] diamond 198 52 1 Archaea               archaeon
28532728 28532728 PRJNA596870_P_NODE_33427_length_247_cov_0.885057_g33294_i0 PRJNA596870 33427 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 143 2.66e-39   NR MDP2437063.1 1906665 g33294 i0 72 0.995951417004049 82 23 99.6 0 1 246 213 294 MDP2437063.1 hypothetical protein [archaeon] diamond 246 143 1 Archaea               archaeon
28690641 28690641 PRJNA596870_P_NODE_40187_length_241_cov_0.916667_g40054_i0 PRJNA596870 40187 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 78.6 5.51e-16   NR MDP2434270.1 1906665 g40054 i0 49.3 0.883817427385892 71 36 88.4 0 12 224 2 72 MDP2434270.1 hypothetical protein [archaeon] diamond 213 78.6 1 Archaea               archaeon
28784972 28784972 PRJNA596870_P_NODE_33807_length_247_cov_0.885057_g33674_i0 PRJNA596870 33807 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 151 2.6899999999999993e-40   NR MDP2435098.1 1906665 g33674 i0 96.3 0.995951417004049 82 3 99.6 0 246 1 544 625 MDP2435098.1 HAD-IC family P-type ATPase [archaeon] diamond 246 151 1 Archaea               archaeon
28911139 28911139 PRJNA596870_P_NODE_34288_length_246_cov_1.606936_g34155_i0 PRJNA596870 34288 246 1.606936 3.95306256 archaeon 1906665 Archaea Archaea 48.9 2.35e-4   NR MCQ2816764.1 1906665 g34155 i0 39.1 0.841463414634146 69 39 84.1 1 212 6 199 264 MCQ2816764.1 hypothetical protein [archaeon] diamond 207 48.9 1 Archaea               archaeon
28943306 28943306 PRJNA596870_P_NODE_19088_length_305_cov_1.327586_g18955_i0 PRJNA596870 19088 305 1.327586 4.0491373 archaeon 1906665 Archaea Archaea 155 9.839999999999999e-47   NR MDP2436333.1 1906665 g18955 i0 87.6 0.875409836065574 89 10 87.5 1 37 303 4 91 MDP2436333.1 30S ribosomal protein S10 [archaeon] diamond 267 155 1 Archaea               archaeon
29921996 29921996 PRJNA596870_P_NODE_14071_length_346_cov_1.410256_g13938_i0 PRJNA596870 14071 346 1.410256 4.87948576 archaeon 1906665 Archaea Archaea 55.8 2.26e-6   NR MDP2434431.1 1906665 g13938 i0 57.9 0.494219653179191 57 19 47.7 2 173 9 226 279 MDP2434431.1 hypothetical protein [archaeon] diamond 171 55.8 1 Archaea               archaeon
29953479 29953479 PRJNA596870_P_NODE_33571_length_247_cov_0.885057_g33438_i0 PRJNA596870 33571 247 0.885057 2.18609079 Haloterrigena alkaliphila 2816475 Archaea Archaea 47.8 6.25e-4   NR WP_207287531.1 2816475 g33438 i0 48 1.21457489878543 50 25 60.7 1 152 3 45 93 WP_207287531.1 DUF4397 domain-containing protein [Haloterrigena alkaliphila] diamond 300 47.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena alkaliphila
30048028 30048028 PRJNA596870_P_NODE_17391_length_317_cov_1.524590_g17258_i0 PRJNA596870 17391 317 1.52459 4.8329503 archaeon 1906665 Archaea Archaea 68.9 3.04e-12   NR MDP2434399.1 1906665 g17258 i0 42 0.766561514195584 81 45 76.7 1 245 3 8 86 MDP2434399.1 hypothetical protein [archaeon] diamond 243 68.9 1 Archaea               archaeon
30079644 30079644 PRJNA596870_P_NODE_14352_length_344_cov_0.926199_g14219_i0 PRJNA596870 14352 344 0.926199 3.18612456 archaeon 1906665 Archaea Archaea 91.7 1.18e-19   NR MDP2434431.1 1906665 g14219 i0 54.3 1.01162790697674 116 38 99.4 6 343 2 73 175 MDP2434431.1 hypothetical protein [archaeon] diamond 348 91.7 1 Archaea               archaeon
30364602 30364602 PRJNA596870_P_NODE_11572_length_375_cov_1.529801_g11439_i0 PRJNA596870 11572 375 1.529801 5.73675375 archaeon 1906665 Archaea Archaea 222 1.1899999999999998e-72   NR MDP2435851.1 1906665 g11439 i0 89.2 0.96 120 13 96 0 360 1 1 120 MDP2435851.1 profilin family protein [archaeon] diamond 360 222 1 Archaea               archaeon
30585190 30585190 PRJNA596870_P_NODE_36993_length_244_cov_0.900585_g36860_i0 PRJNA596870 36993 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 119 1.61e-32   NR MDP2437923.1 1906665 g36860 i0 65 0.983606557377049 80 28 98.4 0 243 4 34 113 MDP2437923.1 40S ribosomal protein S19 [archaeon] diamond 240 119 1 Archaea               archaeon
30616832 30616832 PRJNA596870_P_NODE_22073_length_286_cov_1.446009_g21940_i0 PRJNA596870 22073 286 1.446009 4.13558574 archaeon 1906665 Archaea Archaea 129 6.05e-36   NR MDP2438219.1 1906665 g21940 i0 75.6 0.86013986013986 82 20 86 0 247 2 1 82 MDP2438219.1 30S ribosomal protein S13 [archaeon] diamond 246 129 1 Archaea               archaeon
30711703 30711703 PRJNA596870_P_NODE_37114_length_244_cov_0.900585_g36981_i0 PRJNA596870 37114 244 0.900585 2.1974274 archaeon 1906665 Archaea Archaea 102 3.09e-26   NR MDP2438939.1 1906665 g36981 i0 81.7 0.737704918032787 60 11 73.8 0 180 1 1 60 MDP2438939.1 twin transmembrane helix small protein [archaeon] diamond 180 102 1 Archaea               archaeon
31153687 31153687 PRJNA596870_P_NODE_14055_length_346_cov_1.677656_g13922_i0 PRJNA596870 14055 346 1.677656 5.80468976 archaeon 1906665 Archaea Archaea 57.4 2.13e-7   NR MDP2435168.1 1906665 g13922 i0 37.2 0.745664739884393 86 47 73.7 3 264 10 30 109 MDP2435168.1 hypothetical protein [archaeon] diamond 258 57.4 1 Archaea               archaeon
31185394 31185394 PRJNA596870_P_NODE_38595_length_242_cov_0.911243_g38462_i0 PRJNA596870 38595 242 0.911243 2.20520806 Candidatus Pacearchaeota archaeon CG1 2026773 Archaea Archaea 42.4 0.0487   NR PIN94376.1 1974437 g38462 i0 32.3 0.768595041322314 62 40 74.4 1 209 30 138 199 PIN94376.1 MAG: hypothetical protein COU53_03760 [Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_30_48] diamond 186 42.4 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_30_48
31470480 31470480 PRJNA596870_P_NODE_31356_length_249_cov_0.875000_g31223_i0 PRJNA596870 31356 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 101 7.529999999999999e-23   NR MDP2435462.1 1906665 g31223 i0 57.3 0.987951807228916 82 34 98.8 1 246 1 1 81 MDP2435462.1 hypothetical protein [archaeon] diamond 246 101 1 Archaea               archaeon
32356393 32356393 PRJNA596870_P_NODE_30239_length_250_cov_0.870056_g30106_i0 PRJNA596870 30239 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 118 1.08e-28   NR MDP2434668.1 1906665 g30106 i0 75.6 1.032 86 18 99.6 2 249 1 37 122 MDP2434668.1 protein kinase [archaeon] diamond 258 118 1 Archaea               archaeon
32419452 32419452 PRJNA596870_P_NODE_38819_length_242_cov_0.911243_g38686_i0 PRJNA596870 38819 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 47.8 6.33e-4   NR MDP2435757.1 1906665 g38686 i0 40.2 1.01652892561983 82 23 95.5 3 3 233 30 90 MDP2435757.1 hypothetical protein [archaeon] diamond 246 47.8 1 Archaea               archaeon
32451290 32451290 PRJNA596870_P_NODE_35679_length_245_cov_0.895349_g35546_i0 PRJNA596870 35679 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 55.5 1.27e-6   NR MDP2434735.1 1906665 g35546 i0 53.3 0.551020408163265 45 21 55.1 0 243 109 507 551 MDP2434735.1 hypothetical protein [archaeon] diamond 135 55.5 1 Archaea               archaeon
32546150 32546150 PRJNA596870_P_NODE_20299_length_296_cov_3.076233_g20166_i0 PRJNA596870 20299 296 3.076233 9.10564968 archaeon 1906665 Archaea Archaea 94.4 5.15e-21   NR MCQ2821136.1 1906665 g20166 i0 66.7 0.942567567567568 93 31 94.3 0 284 6 1 93 MCQ2821136.1 hypothetical protein [archaeon] diamond 279 94.4 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;