RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA596870", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA596870 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24794476 24794476 PRJNA596870_P_NODE_25340_length_270_cov_0.842640_g25207_i0 PRJNA596870 25340 270 0.84264 2.275128 Gammaretrovirus murleu 3428959 Viruses Viruses 483 7.409999999999998e-132   NTclustered gi|375344385|gb|JQ048953.1| 11786 g25207 i0 98.889 99.9333333333333 270 3 100 0 1 270 408 139 Murine leukemia virus isolate PCR amplicon 3220_2 group specific antigen (gag) gene, partial cds blastn 26982 483 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
32197936 32197936 PRJNA596870_P_NODE_29458_length_251_cov_0.865169_g29325_i0 PRJNA596870 29458 251 0.865169 2.17157419 Paper mulberry vein-banding virus 2810460 Viruses Viruses 97.4 2.42e-21   NR QRN45547.1 2810460 g29325 i0 66.3 0.956175298804781 80 25 95.6 2 245 6 503 580 QRN45547.1 P3 [Paper mulberry vein-banding virus] diamond 240 97.4 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Badnavirus Paper mulberry vein-banding virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;