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contig_metadata

13 rows where bioproject = "PRJNA596870", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 13 ✖

tax_kingdom 1

  • Metazoa · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA596870 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
568350 568350 PRJNA596870_P_NODE_24201_length_275_cov_1.856436_g24068_i0 PRJNA596870 24201 275 1.856436 5.105199 Fictor sp. 2 VS-2014 1538695 Nematoda Nematoda 196 1.1e-45   NTclustered gi|675119079|gb|KJ877419.1| 1538695 g24068 i0 85.638 66.7745454545455 188 25 68 2 1 187 235 49 Fictor sp. 2 VS-2014 strain RS9002 small subunit ribosomal protein 14 (rps-14) mRNA, partial cds blastn 18363 196 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Fictor Fictor sp. 2 VS-2014
2415962 2415962 PRJNA596870_P_NODE_6842_length_470_cov_1.163728_g6709_i0 PRJNA596870 6842 470 1.163728 5.4695216 root 1 Root_unresolved Root_unresolved 135 1.22e-35   NR VDK51241.1 6269 g6709 i0 71.6 1.54468085106383 88 25 56.2 0 266 3 18 105 VDK51241.1 unnamed protein product [Anisakis simplex] diamond 726 135 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
3119088 3119088 PRJNA596870_P_NODE_10703_length_388_cov_1.209524_g10570_i0 PRJNA596870 10703 388 1.209524 4.69295312 Strongyloides ratti 34506 Nematoda Nematoda 368 3.2400000000000003e-97   NTclustered gi|1376142265|ref|XM_024651434.1| 34506 g10570 i0 83.938 99.319587628866 386 60 99 2 1 385 727 1111 Strongyloides ratti Elongation factor 1-alpha (SRAE_2000058600), partial mRNA blastn 38536 368 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
10772676 10772676 PRJNA596870_P_NODE_25429_length_269_cov_1.571429_g25296_i0 PRJNA596870 25429 269 1.571429 4.22714401 Caenorhabditis elegans 6239 Nematoda Nematoda 154 6.57e-33   NTclustered gi|1734332372|ref|NM_070393.5| 6239 g25296 i0 81.622 16.8327137546468 185 34 69 0 53 237 208 24 Caenorhabditis elegans Small ribosomal subunit protein uS13 (rps-18), mRNA blastn 4528 154 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
17146015 17146015 PRJNA596870_P_NODE_24714_length_273_cov_1.155000_g24581_i0 PRJNA596870 24714 273 1.155 3.15315 Strongyloides ratti 34506 Nematoda Nematoda 237 6.45e-58   NTclustered gi|1376152089|ref|XM_024644563.1| 34506 g24581 i0 83.077 88.029304029304 260 44 95 0 2 261 764 505 Strongyloides ratti Calcium/calmodulin-dependent protein kinase type II subunit delta (SRAE_X000024300), partial mRNA blastn 24032 237 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
17718419 17718419 PRJNA596870_P_NODE_5894_length_502_cov_1.361305_g5761_i0 PRJNA596870 5894 502 1.361305 6.8337511 Metazoa 33208 Nematoda Nematoda 479 1.9e-130   NTclustered gi|1376146183|ref|XM_024653652.1| 34506 g5761 i0 84.064 84.2749003984064 502 74 99 6 4 502 1229 731 Strongyloides ratti ATP synthase subunit beta (SRAE_2000256800), partial mRNA blastn 42306 479 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
22817636 22817636 PRJNA596870_P_NODE_11138_length_381_cov_1.435065_g11005_i0 PRJNA596870 11138 381 1.435065 5.46759765 Metazoa 33208 Nematoda Nematoda 190 1.6199999999999998e-54   NR XP_003379656.1 6334 g11005 i0 69.8 53.5905511811024 126 38 99.2 0 380 3 379 504 XP_003379656.1 heat shockprotein C [Trichinella spiralis] diamond 20418 191 0.994764397905759 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
28988194 28988194 PRJNA596870_P_NODE_29828_length_251_cov_0.865169_g29695_i0 PRJNA596870 29828 251 0.865169 2.17157419 Rhabditida 6236 Nematoda Nematoda 112 6.28e-28   NR VDO95798.1 6339 g29695 i0 89.7 14.5458167330677 58 6 69.3 0 176 3 94 151 VDO95798.1 unnamed protein product [Heligmosomoides polygyrus] diamond 3651 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
29303655 29303655 PRJNA596870_P_NODE_21009_length_292_cov_1.054795_g20876_i0 PRJNA596870 21009 292 1.054795 3.0800014 Metazoa 33208 Nematoda Nematoda 124 1.6200000000000002e-33   NR KAE9420224.1 6313 g20876 i0 77.9 175.356164383562 68 15 69.9 0 287 84 104 171 KAE9420224.1 hypothetical protein Angca_009488 [Angiostrongylus cantonensis] diamond 51204 125 0.992 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
30016746 30016746 PRJNA596870_P_NODE_31571_length_249_cov_0.875000_g31438_i0 PRJNA596870 31571 249 0.875 2.17875 Aphelenchoides fujianensis 1052528 Nematoda Nematoda 48.5 3.31e-4   NR KAI6233644.1 1052528 g31438 i0 59.5 0.879518072289157 37 15 44.6 0 96 206 3 39 KAI6233644.1 CBR-UNC-50 protein [Aphelenchoides fujianensis] diamond 219 48.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides fujianensis
30522135 30522135 PRJNA596870_P_NODE_31753_length_249_cov_0.875000_g31620_i0 PRJNA596870 31753 249 0.875 2.17875 Trichuris suis 68888 Nematoda Nematoda 85.9 2.2e-19   NR KFD50175.1 68888 g31620 i0 56.3 9.98795180722892 80 35 96.4 0 240 1 16 95 KFD50175.1 hypothetical protein M513_08920 [Trichuris suis] diamond 2487 85.9 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
30598576 30598576 PRJNA596870_P_NODE_32813_length_248_cov_0.880000_g32680_i0 PRJNA596870 32813 248 0.88 2.1824 Metazoa 33208 Nematoda Nematoda 90.9 4.26e-19   NR KHN82290.1 6265 g32680 i0 50.6 3.87096774193548 81 39 98 1 1 243 141 220 KHN82290.1 Pyruvate kinase PKLR [Toxocara canis] diamond 960 91.3 0.995618838992333 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
31027868 31027868 PRJNA596870_P_NODE_4215_length_582_cov_1.056974_g4084_i0 PRJNA596870 4215 582 1.056974 6.15158868 Heterodera schachtii 97005 Nematoda Nematoda 112 8.01e-27   NR KAL3103729.1 97005 g4084 i0 78.9 1.4639175257732 71 14 36.1 1 578 369 121 191 KAL3103729.1 hypothetical protein niasHS_001331 [Heterodera schachtii] diamond 852 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera schachtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;